RNA–Protein interactions for RNA: ENST00000350623.7

CASP2-202, Transcript of caspase 2, humanhuman

TSL 1 (best)

Gene CASP2, Length 1,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP2-202ENST00000350623 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
CASP2-202ENST00000350623 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
CASP2-202ENST00000350623 ABCC9O60706 1549 aa30.37■■■□□ 2.45
CASP2-202ENST00000350623 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
CASP2-202ENST00000350623 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
CASP2-202ENST00000350623 NACADO15069 1562 aa28.99■■■□□ 2.23
CASP2-202ENST00000350623 ZCCHC6Q5VYS8 1495 aaKnown RBP28.92■■■□□ 2.22
CASP2-202ENST00000350623 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
CASP2-202ENST00000350623 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
CASP2-202ENST00000350623 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
CASP2-202ENST00000350623 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
CASP2-202ENST00000350623 SCRIBQ14160 1630 aa28.35■■■□□ 2.13
CASP2-202ENST00000350623 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
CASP2-202ENST00000350623 DNAJC5BQ9UF47 199 aa27.94■■■□□ 2.06
CASP2-202ENST00000350623 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
CASP2-202ENST00000350623 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
CASP2-202ENST00000350623 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
CASP2-202ENST00000350623 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.95
CASP2-202ENST00000350623 SMARCA4P51532 1647 aa27.03■■□□□ 1.92
CASP2-202ENST00000350623 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
CASP2-202ENST00000350623 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
CASP2-202ENST00000350623 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
CASP2-202ENST00000350623 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
CASP2-202ENST00000350623 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
CASP2-202ENST00000350623 WIZO95785 1651 aa26.66■■□□□ 1.86
CASP2-202ENST00000350623 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
CASP2-202ENST00000350623 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
CASP2-202ENST00000350623 BAZ1BQ9UIG0 1483 aaKnown RBP26.59■■□□□ 1.85
CASP2-202ENST00000350623 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
CASP2-202ENST00000350623 NESP48681 1621 aa26.32■■□□□ 1.8
CASP2-202ENST00000350623 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
CASP2-202ENST00000350623 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
CASP2-202ENST00000350623 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
CASP2-202ENST00000350623 LAMC3Q9Y6N6 1575 aa26.08■■□□□ 1.77
CASP2-202ENST00000350623 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
CASP2-202ENST00000350623 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
CASP2-202ENST00000350623 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
CASP2-202ENST00000350623 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
CASP2-202ENST00000350623 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
CASP2-202ENST00000350623 CFTRP13569 1480 aa25.81■■□□□ 1.72
CASP2-202ENST00000350623 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
CASP2-202ENST00000350623 CUX2O14529 1486 aa25.75■■□□□ 1.71
CASP2-202ENST00000350623 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
CASP2-202ENST00000350623 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
CASP2-202ENST00000350623 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
CASP2-202ENST00000350623 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
CASP2-202ENST00000350623 WDR62O43379 1518 aa25.6■■□□□ 1.69
CASP2-202ENST00000350623 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
CASP2-202ENST00000350623 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
CASP2-202ENST00000350623 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
CASP2-202ENST00000350623 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
CASP2-202ENST00000350623 CUX1P39880 1505 aa25.19■■□□□ 1.62
CASP2-202ENST00000350623 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
CASP2-202ENST00000350623 ZNF608Q9ULD9 1512 aaPredicted RBP25.15■■□□□ 1.62
CASP2-202ENST00000350623 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
CASP2-202ENST00000350623 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
CASP2-202ENST00000350623 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
CASP2-202ENST00000350623 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
CASP2-202ENST00000350623 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.6
CASP2-202ENST00000350623 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
CASP2-202ENST00000350623 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
CASP2-202ENST00000350623 SYNJ1O43426 1573 aa25.01■■□□□ 1.59
CASP2-202ENST00000350623 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
CASP2-202ENST00000350623 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
CASP2-202ENST00000350623 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.595e-7■■■■■ 30.3
CASP2-202ENST00000350623 SOGA1O94964 1423 aa24.95■■□□□ 1.59
CASP2-202ENST00000350623 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
CASP2-202ENST00000350623 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
CASP2-202ENST00000350623 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
CASP2-202ENST00000350623 CHD1O14646 1710 aa24.86■■□□□ 1.57
CASP2-202ENST00000350623 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
CASP2-202ENST00000350623 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
CASP2-202ENST00000350623 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
CASP2-202ENST00000350623 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
CASP2-202ENST00000350623 GAPVD1Q14C86 1478 aa24.69■■□□□ 1.54
CASP2-202ENST00000350623 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
CASP2-202ENST00000350623 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
CASP2-202ENST00000350623 FBLN2P98095 1184 aa24.63■■□□□ 1.53
CASP2-202ENST00000350623 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
CASP2-202ENST00000350623 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
CASP2-202ENST00000350623 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
CASP2-202ENST00000350623 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
CASP2-202ENST00000350623 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
CASP2-202ENST00000350623 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
CASP2-202ENST00000350623 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
CASP2-202ENST00000350623 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
CASP2-202ENST00000350623 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
CASP2-202ENST00000350623 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
CASP2-202ENST00000350623 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
CASP2-202ENST00000350623 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
CASP2-202ENST00000350623 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
CASP2-202ENST00000350623 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
CASP2-202ENST00000350623 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
CASP2-202ENST00000350623 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
CASP2-202ENST00000350623 IGF1RP08069 1367 aa24.28■■□□□ 1.48
CASP2-202ENST00000350623 CUL7Q14999 1698 aa24.27■■□□□ 1.48
CASP2-202ENST00000350623 NUP160Q12769 1436 aa24.25■■□□□ 1.47
CASP2-202ENST00000350623 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
CASP2-202ENST00000350623 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
CASP2-202ENST00000350623 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms