RNA–Protein interactions for RNA: ENST00000347364.7

MKKS-201, Transcript of McKusick-Kaufman syndrome, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKKS, Length 6,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKKS-201ENST00000347364 NISCHQ9Y2I1 1504 aa14.61□□□□□ -0.07
MKKS-201ENST00000347364 HRCP23327 699 aa13.11□□□□□ -0.31
MKKS-201ENST00000347364 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
MKKS-201ENST00000347364 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
MKKS-201ENST00000347364 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
MKKS-201ENST00000347364 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
MKKS-201ENST00000347364 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
MKKS-201ENST00000347364 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
MKKS-201ENST00000347364 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
MKKS-201ENST00000347364 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
MKKS-201ENST00000347364 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
MKKS-201ENST00000347364 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
MKKS-201ENST00000347364 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
MKKS-201ENST00000347364 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.44
MKKS-201ENST00000347364 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
MKKS-201ENST00000347364 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
MKKS-201ENST00000347364 MYT1Q01538 1121 aa12.05□□□□□ -0.48
MKKS-201ENST00000347364 ACIN1Q9UKV3 1341 aaKnown RBP12.05□□□□□ -0.48
MKKS-201ENST00000347364 NEUROD1Q13562 356 aa12.02□□□□□ -0.49
MKKS-201ENST00000347364 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
MKKS-201ENST00000347364 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
MKKS-201ENST00000347364 ABCC9O60706 1549 aa11.79□□□□□ -0.52
MKKS-201ENST00000347364 TRIM41Q8WV44 630 aa11.78□□□□□ -0.52
MKKS-201ENST00000347364 CENPBP07199 599 aaPredicted RBP11.73□□□□□ -0.53
MKKS-201ENST00000347364 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
MKKS-201ENST00000347364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
MKKS-201ENST00000347364 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
MKKS-201ENST00000347364 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
MKKS-201ENST00000347364 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
MKKS-201ENST00000347364 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
MKKS-201ENST00000347364 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
MKKS-201ENST00000347364 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
MKKS-201ENST00000347364 MIER1Q8N108 512 aa11.48□□□□□ -0.57
MKKS-201ENST00000347364 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.57
MKKS-201ENST00000347364 CECR2Q9BXF3 1484 aa11.42□□□□□ -0.58
MKKS-201ENST00000347364 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
MKKS-201ENST00000347364 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
MKKS-201ENST00000347364 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
MKKS-201ENST00000347364 CEP162Q5TB80 1403 aa11.41□□□□□ -0.58
MKKS-201ENST00000347364 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
MKKS-201ENST00000347364 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
MKKS-201ENST00000347364 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
MKKS-201ENST00000347364 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
MKKS-201ENST00000347364 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
MKKS-201ENST00000347364 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
MKKS-201ENST00000347364 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
MKKS-201ENST00000347364 EEA1Q15075 1411 aa11.3□□□□□ -0.6
MKKS-201ENST00000347364 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
MKKS-201ENST00000347364 SOGA1O94964 1423 aa11.27□□□□□ -0.61
MKKS-201ENST00000347364 SCRIBQ14160 1630 aa11.27□□□□□ -0.61
MKKS-201ENST00000347364 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
MKKS-201ENST00000347364 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.62
MKKS-201ENST00000347364 RUSC2Q8N2Y8 1516 aa11.18□□□□□ -0.62
MKKS-201ENST00000347364 DHX57Q6P158 1386 aaKnown RBP11.18□□□□□ -0.62
MKKS-201ENST00000347364 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
MKKS-201ENST00000347364 VPS8Q8N3P4 1428 aa11.16□□□□□ -0.62
MKKS-201ENST00000347364 CLIP1P30622 1438 aa11.16□□□□□ -0.62
MKKS-201ENST00000347364 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
MKKS-201ENST00000347364 WIZO95785 1651 aa11.15□□□□□ -0.62
MKKS-201ENST00000347364 NACADO15069 1562 aa11.1□□□□□ -0.63
MKKS-201ENST00000347364 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
MKKS-201ENST00000347364 CUX2O14529 1486 aa11.1□□□□□ -0.63
MKKS-201ENST00000347364 TOP2AP11388 1531 aaKnown RBP11.09□□□□□ -0.63
MKKS-201ENST00000347364 SMARCA2P51531 1590 aa11.06□□□□□ -0.64
MKKS-201ENST00000347364 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
MKKS-201ENST00000347364 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
MKKS-201ENST00000347364 UBTFP17480 764 aaKnown RBP11.02□□□□□ -0.65
MKKS-201ENST00000347364 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
MKKS-201ENST00000347364 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
MKKS-201ENST00000347364 MSH5O43196 834 aa11.01□□□□□ -0.65
MKKS-201ENST00000347364 KIF21BO75037 1637 aa11□□□□□ -0.65
MKKS-201ENST00000347364 RRBP1Q9P2E9 1410 aaKnown RBP11□□□□□ -0.65
MKKS-201ENST00000347364 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
MKKS-201ENST00000347364 FANCIQ9NVI1 1328 aa10.94□□□□□ -0.66
MKKS-201ENST00000347364 PPP1R15AO75807 674 aaPredicted RBP10.92□□□□□ -0.66
MKKS-201ENST00000347364 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
MKKS-201ENST00000347364 PRXQ9BXM0 1461 aa10.91□□□□□ -0.66
MKKS-201ENST00000347364 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
MKKS-201ENST00000347364 FKBP8Q14318 412 aa10.9□□□□□ -0.66
MKKS-201ENST00000347364 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.67
MKKS-201ENST00000347364 SMARCA4P51532 1647 aa10.89□□□□□ -0.67
MKKS-201ENST00000347364 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
MKKS-201ENST00000347364 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
MKKS-201ENST00000347364 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
MKKS-201ENST00000347364 BCANQ96GW7 911 aa10.86□□□□□ -0.67
MKKS-201ENST00000347364 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
MKKS-201ENST00000347364 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
MKKS-201ENST00000347364 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
MKKS-201ENST00000347364 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
MKKS-201ENST00000347364 RAB3GAP2Q9H2M9 1393 aa10.8□□□□□ -0.68
MKKS-201ENST00000347364 APLP2Q06481 763 aa10.8□□□□□ -0.68
MKKS-201ENST00000347364 DDX10Q13206 875 aaKnown RBP10.77□□□□□ -0.69
MKKS-201ENST00000347364 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
MKKS-201ENST00000347364 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
MKKS-201ENST00000347364 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
MKKS-201ENST00000347364 ITGAEP38570 1179 aa10.74□□□□□ -0.69
MKKS-201ENST00000347364 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
MKKS-201ENST00000347364 MAP3K1Q13233 1512 aa10.73□□□□□ -0.69
MKKS-201ENST00000347364 ARHGAP35Q9NRY4 1499 aa10.72□□□□□ -0.69
MKKS-201ENST00000347364 NEFLP07196 543 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms