RNA–Protein interactions for RNA: ENST00000345042.6

HSPD1-201, Transcript of heat shock protein family D (Hsp60) member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HSPD1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPD1-201ENST00000345042 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
HSPD1-201ENST00000345042 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
HSPD1-201ENST00000345042 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
HSPD1-201ENST00000345042 ABCC9O60706 1549 aa23.95■■□□□ 1.43
HSPD1-201ENST00000345042 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
HSPD1-201ENST00000345042 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
HSPD1-201ENST00000345042 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
HSPD1-201ENST00000345042 NACADO15069 1562 aa23.47■■□□□ 1.35
HSPD1-201ENST00000345042 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
HSPD1-201ENST00000345042 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
HSPD1-201ENST00000345042 SCRIBQ14160 1630 aa23.07■■□□□ 1.28
HSPD1-201ENST00000345042 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
HSPD1-201ENST00000345042 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
HSPD1-201ENST00000345042 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.193e-18■■■□□ 14.8
HSPD1-201ENST00000345042 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
HSPD1-201ENST00000345042 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
HSPD1-201ENST00000345042 SUPT5HO00267 1087 aaKnown RBP22.13■■□□□ 1.13
HSPD1-201ENST00000345042 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
HSPD1-201ENST00000345042 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
HSPD1-201ENST00000345042 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
HSPD1-201ENST00000345042 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
HSPD1-201ENST00000345042 WIZO95785 1651 aa21.94■■□□□ 1.1
HSPD1-201ENST00000345042 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
HSPD1-201ENST00000345042 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
HSPD1-201ENST00000345042 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
HSPD1-201ENST00000345042 TOP2AP11388 1531 aaKnown RBP21.72■■□□□ 1.07
HSPD1-201ENST00000345042 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
HSPD1-201ENST00000345042 BAZ1BQ9UIG0 1483 aaKnown RBP21.65■■□□□ 1.06
HSPD1-201ENST00000345042 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
HSPD1-201ENST00000345042 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
HSPD1-201ENST00000345042 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
HSPD1-201ENST00000345042 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
HSPD1-201ENST00000345042 CFTRP13569 1480 aa21.09■□□□□ 0.97
HSPD1-201ENST00000345042 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
HSPD1-201ENST00000345042 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
HSPD1-201ENST00000345042 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
HSPD1-201ENST00000345042 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
HSPD1-201ENST00000345042 NESP48681 1621 aa20.94■□□□□ 0.94
HSPD1-201ENST00000345042 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
HSPD1-201ENST00000345042 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
HSPD1-201ENST00000345042 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
HSPD1-201ENST00000345042 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
HSPD1-201ENST00000345042 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
HSPD1-201ENST00000345042 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
HSPD1-201ENST00000345042 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
HSPD1-201ENST00000345042 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
HSPD1-201ENST00000345042 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
HSPD1-201ENST00000345042 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
HSPD1-201ENST00000345042 CUX1P39880 1505 aa20.71■□□□□ 0.91
HSPD1-201ENST00000345042 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
HSPD1-201ENST00000345042 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
HSPD1-201ENST00000345042 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
HSPD1-201ENST00000345042 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
HSPD1-201ENST00000345042 MRC2Q9UBG0 1479 aa20.55■□□□□ 0.88
HSPD1-201ENST00000345042 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
HSPD1-201ENST00000345042 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
HSPD1-201ENST00000345042 SOGA1O94964 1423 aa20.47■□□□□ 0.87
HSPD1-201ENST00000345042 WDR62O43379 1518 aa20.47■□□□□ 0.87
HSPD1-201ENST00000345042 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
HSPD1-201ENST00000345042 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
HSPD1-201ENST00000345042 EEA1Q15075 1411 aa20.41■□□□□ 0.86
HSPD1-201ENST00000345042 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
HSPD1-201ENST00000345042 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
HSPD1-201ENST00000345042 WDR97A6NE52 1622 aa20.34■□□□□ 0.85
HSPD1-201ENST00000345042 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
HSPD1-201ENST00000345042 CUX2O14529 1486 aa20.33■□□□□ 0.85
HSPD1-201ENST00000345042 KIF27Q86VH2 1401 aa20.33■□□□□ 0.84
HSPD1-201ENST00000345042 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
HSPD1-201ENST00000345042 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
HSPD1-201ENST00000345042 IFT140Q96RY7 1462 aa20.26■□□□□ 0.83
HSPD1-201ENST00000345042 ABCA5Q8WWZ7 1642 aa20.22■□□□□ 0.83
HSPD1-201ENST00000345042 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
HSPD1-201ENST00000345042 KIF21BO75037 1637 aa20.18■□□□□ 0.82
HSPD1-201ENST00000345042 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
HSPD1-201ENST00000345042 GAPVD1Q14C86 1478 aa20.16■□□□□ 0.82
HSPD1-201ENST00000345042 IGF1RP08069 1367 aa20.15■□□□□ 0.82
HSPD1-201ENST00000345042 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
HSPD1-201ENST00000345042 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
HSPD1-201ENST00000345042 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
HSPD1-201ENST00000345042 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
HSPD1-201ENST00000345042 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
HSPD1-201ENST00000345042 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
HSPD1-201ENST00000345042 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
HSPD1-201ENST00000345042 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.815e-8■■■■□ 25.1
HSPD1-201ENST00000345042 CUL7Q14999 1698 aa20.09■□□□□ 0.81
HSPD1-201ENST00000345042 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.81
HSPD1-201ENST00000345042 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
HSPD1-201ENST00000345042 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
HSPD1-201ENST00000345042 UBTFP17480 764 aaKnown RBP19.99■□□□□ 0.79
HSPD1-201ENST00000345042 TNIKQ9UKE5 1360 aa19.98■□□□□ 0.79
HSPD1-201ENST00000345042 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
HSPD1-201ENST00000345042 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
HSPD1-201ENST00000345042 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
HSPD1-201ENST00000345042 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
HSPD1-201ENST00000345042 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
HSPD1-201ENST00000345042 CTTNBP2Q8WZ74 1663 aa19.84■□□□□ 0.77
HSPD1-201ENST00000345042 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
HSPD1-201ENST00000345042 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
HSPD1-201ENST00000345042 CLIP1P30622 1438 aa19.77■□□□□ 0.75
HSPD1-201ENST00000345042 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms