RNA–Protein interactions for RNA: ENST00000344042.5

HM13-203, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-203ENST00000344042 NISCHQ9Y2I1 1504 aa34.32■■■■□ 3.08
HM13-203ENST00000344042 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
HM13-203ENST00000344042 ABCC9O60706 1549 aa30.37■■■□□ 2.45
HM13-203ENST00000344042 RB1CC1Q8TDY2 1594 aa29.04■■■□□ 2.24
HM13-203ENST00000344042 NACADO15069 1562 aa28.93■■■□□ 2.22
HM13-203ENST00000344042 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
HM13-203ENST00000344042 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
HM13-203ENST00000344042 ZCCHC6Q5VYS8 1495 aaKnown RBP28.52■■■□□ 2.16
HM13-203ENST00000344042 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
HM13-203ENST00000344042 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
HM13-203ENST00000344042 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
HM13-203ENST00000344042 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
HM13-203ENST00000344042 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
HM13-203ENST00000344042 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
HM13-203ENST00000344042 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
HM13-203ENST00000344042 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
HM13-203ENST00000344042 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
HM13-203ENST00000344042 CECR2Q9BXF3 1484 aa27.35■■□□□ 1.97
HM13-203ENST00000344042 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
HM13-203ENST00000344042 SMARCA4P51532 1647 aa26.7■■□□□ 1.86
HM13-203ENST00000344042 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
HM13-203ENST00000344042 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
HM13-203ENST00000344042 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
HM13-203ENST00000344042 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
HM13-203ENST00000344042 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
HM13-203ENST00000344042 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
HM13-203ENST00000344042 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
HM13-203ENST00000344042 NESP48681 1621 aa26.2■■□□□ 1.78
HM13-203ENST00000344042 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
HM13-203ENST00000344042 WIZO95785 1651 aa26.11■■□□□ 1.77
HM13-203ENST00000344042 CUX2O14529 1486 aa26.11■■□□□ 1.77
HM13-203ENST00000344042 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
HM13-203ENST00000344042 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
HM13-203ENST00000344042 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
HM13-203ENST00000344042 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
HM13-203ENST00000344042 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
HM13-203ENST00000344042 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
HM13-203ENST00000344042 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
HM13-203ENST00000344042 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
HM13-203ENST00000344042 CFTRP13569 1480 aa25.7■■□□□ 1.7
HM13-203ENST00000344042 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
HM13-203ENST00000344042 WDR62O43379 1518 aa25.61■■□□□ 1.69
HM13-203ENST00000344042 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
HM13-203ENST00000344042 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
HM13-203ENST00000344042 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
HM13-203ENST00000344042 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
HM13-203ENST00000344042 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
HM13-203ENST00000344042 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
HM13-203ENST00000344042 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
HM13-203ENST00000344042 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
HM13-203ENST00000344042 DNMBPQ6XZF7 1577 aa25.07■■□□□ 1.6
HM13-203ENST00000344042 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
HM13-203ENST00000344042 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
HM13-203ENST00000344042 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
HM13-203ENST00000344042 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
HM13-203ENST00000344042 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
HM13-203ENST00000344042 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
HM13-203ENST00000344042 CUX1P39880 1505 aa24.83■■□□□ 1.57
HM13-203ENST00000344042 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.567e-8■■■■□ 26.4
HM13-203ENST00000344042 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
HM13-203ENST00000344042 SOGA1O94964 1423 aa24.78■■□□□ 1.56
HM13-203ENST00000344042 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
HM13-203ENST00000344042 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
HM13-203ENST00000344042 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
HM13-203ENST00000344042 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
HM13-203ENST00000344042 CHD1O14646 1710 aa24.62■■□□□ 1.53
HM13-203ENST00000344042 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
HM13-203ENST00000344042 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
HM13-203ENST00000344042 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
HM13-203ENST00000344042 SNAPC4Q5SXM2 1469 aa24.57■■□□□ 1.52
HM13-203ENST00000344042 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
HM13-203ENST00000344042 ARHGEF11O15085 1522 aa24.55■■□□□ 1.52
HM13-203ENST00000344042 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
HM13-203ENST00000344042 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
HM13-203ENST00000344042 FBLN2P98095 1184 aa24.5■■□□□ 1.51
HM13-203ENST00000344042 GAPVD1Q14C86 1478 aa24.49■■□□□ 1.51
HM13-203ENST00000344042 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
HM13-203ENST00000344042 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
HM13-203ENST00000344042 BIVM-ERCC5R4GMW8 1640 aa24.49■■□□□ 1.51
HM13-203ENST00000344042 WRNQ14191 1432 aaPredicted RBP eCLIP24.48■■□□□ 1.51
HM13-203ENST00000344042 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
HM13-203ENST00000344042 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
HM13-203ENST00000344042 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
HM13-203ENST00000344042 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
HM13-203ENST00000344042 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
HM13-203ENST00000344042 ARAP1Q96P48 1450 aa24.34■■□□□ 1.49
HM13-203ENST00000344042 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
HM13-203ENST00000344042 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
HM13-203ENST00000344042 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
HM13-203ENST00000344042 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
HM13-203ENST00000344042 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
HM13-203ENST00000344042 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
HM13-203ENST00000344042 NUP160Q12769 1436 aa24.19■■□□□ 1.46
HM13-203ENST00000344042 CEP170Q5SW79 1584 aa24.15■■□□□ 1.46
HM13-203ENST00000344042 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
HM13-203ENST00000344042 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
HM13-203ENST00000344042 IGF1RP08069 1367 aa24.01■■□□□ 1.43
HM13-203ENST00000344042 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
HM13-203ENST00000344042 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
HM13-203ENST00000344042 CUL7Q14999 1698 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms