RNA–Protein interactions for RNA: ENST00000344022.7

PXMP4-202, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-202ENST00000344022 NISCHQ9Y2I1 1504 aa38.6■■■■□ 3.77
PXMP4-202ENST00000344022 AEBP2Q6ZN18 517 aaPredicted RBP36.07■■■■□ 3.36
PXMP4-202ENST00000344022 CHIC1Q5VXU3 224 aa35.43■■■■□ 3.26
PXMP4-202ENST00000344022 CCDC180Q9P1Z9 1646 aa34.53■■■■□ 3.12
PXMP4-202ENST00000344022 ABCC9O60706 1549 aa34.12■■■■□ 3.05
PXMP4-202ENST00000344022 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
PXMP4-202ENST00000344022 NACADO15069 1562 aa32.57■■■□□ 2.8
PXMP4-202ENST00000344022 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.79
PXMP4-202ENST00000344022 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
PXMP4-202ENST00000344022 ZCCHC6Q5VYS8 1495 aaKnown RBP32.06■■■□□ 2.72
PXMP4-202ENST00000344022 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
PXMP4-202ENST00000344022 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
PXMP4-202ENST00000344022 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
PXMP4-202ENST00000344022 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
PXMP4-202ENST00000344022 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
PXMP4-202ENST00000344022 SCRIBQ14160 1630 aa31.43■■■□□ 2.62
PXMP4-202ENST00000344022 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
PXMP4-202ENST00000344022 PHF23Q9BUL5 403 aaPredicted RBP31.15■■■□□ 2.58
PXMP4-202ENST00000344022 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
PXMP4-202ENST00000344022 CC2D2AQ9P2K1 1620 aa30.86■■■□□ 2.53
PXMP4-202ENST00000344022 CECR2Q9BXF3 1484 aa30.73■■■□□ 2.51
PXMP4-202ENST00000344022 SENP3Q9H4L4 574 aaPredicted RBP30.66■■■□□ 2.5
PXMP4-202ENST00000344022 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
PXMP4-202ENST00000344022 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
PXMP4-202ENST00000344022 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
PXMP4-202ENST00000344022 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
PXMP4-202ENST00000344022 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
PXMP4-202ENST00000344022 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
PXMP4-202ENST00000344022 PEG3Q9GZU2 1588 aa29.76■■■□□ 2.35
PXMP4-202ENST00000344022 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
PXMP4-202ENST00000344022 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
PXMP4-202ENST00000344022 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
PXMP4-202ENST00000344022 NESP48681 1621 aa29.39■■■□□ 2.3
PXMP4-202ENST00000344022 WIZO95785 1651 aa29.39■■■□□ 2.3
PXMP4-202ENST00000344022 CUX2O14529 1486 aa29.33■■■□□ 2.29
PXMP4-202ENST00000344022 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
PXMP4-202ENST00000344022 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
PXMP4-202ENST00000344022 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
PXMP4-202ENST00000344022 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
PXMP4-202ENST00000344022 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
PXMP4-202ENST00000344022 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
PXMP4-202ENST00000344022 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
PXMP4-202ENST00000344022 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
PXMP4-202ENST00000344022 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
PXMP4-202ENST00000344022 CFTRP13569 1480 aa28.87■■■□□ 2.21
PXMP4-202ENST00000344022 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
PXMP4-202ENST00000344022 CEP164Q9UPV0 1460 aa28.81■■■□□ 2.2
PXMP4-202ENST00000344022 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
PXMP4-202ENST00000344022 WDR62O43379 1518 aa28.76■■■□□ 2.19
PXMP4-202ENST00000344022 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
PXMP4-202ENST00000344022 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
PXMP4-202ENST00000344022 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
PXMP4-202ENST00000344022 FOXD1Q16676 465 aa28.4■■■□□ 2.14
PXMP4-202ENST00000344022 ABCC8Q09428 1581 aa28.33■■■□□ 2.13
PXMP4-202ENST00000344022 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
PXMP4-202ENST00000344022 IFT140Q96RY7 1462 aa28.24■■■□□ 2.11
PXMP4-202ENST00000344022 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
PXMP4-202ENST00000344022 SUPT5HO00267 1087 aaKnown RBP28.22■■■□□ 2.11
PXMP4-202ENST00000344022 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
PXMP4-202ENST00000344022 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
PXMP4-202ENST00000344022 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
PXMP4-202ENST00000344022 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
PXMP4-202ENST00000344022 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
PXMP4-202ENST00000344022 SOGA1O94964 1423 aa27.92■■■□□ 2.06
PXMP4-202ENST00000344022 CUX1P39880 1505 aa27.91■■■□□ 2.06
PXMP4-202ENST00000344022 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.06
PXMP4-202ENST00000344022 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
PXMP4-202ENST00000344022 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
PXMP4-202ENST00000344022 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
PXMP4-202ENST00000344022 TDRD9Q8NDG6 1382 aaKnown RBP27.79■■■□□ 2.04
PXMP4-202ENST00000344022 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
PXMP4-202ENST00000344022 CHD1O14646 1710 aa27.72■■■□□ 2.03
PXMP4-202ENST00000344022 FBLN2P98095 1184 aa27.68■■■□□ 2.02
PXMP4-202ENST00000344022 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
PXMP4-202ENST00000344022 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.01
PXMP4-202ENST00000344022 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
PXMP4-202ENST00000344022 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
PXMP4-202ENST00000344022 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
PXMP4-202ENST00000344022 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
PXMP4-202ENST00000344022 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
PXMP4-202ENST00000344022 ARHGEF11O15085 1522 aa27.56■■■□□ 2
PXMP4-202ENST00000344022 PBRM1Q86U86 1689 aa27.55■■■□□ 2
PXMP4-202ENST00000344022 SYNJ1O43426 1573 aa27.53■■■□□ 2
PXMP4-202ENST00000344022 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
PXMP4-202ENST00000344022 SYNJ2O15056 1496 aa27.51■■■□□ 2
PXMP4-202ENST00000344022 ADRA2BP18089 450 aa27.48■■□□□ 1.99
PXMP4-202ENST00000344022 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
PXMP4-202ENST00000344022 CLASP1Q7Z460 1538 aa27.4■■□□□ 1.98
PXMP4-202ENST00000344022 CYB5RLQ6IPT4 315 aa27.34■■□□□ 1.97
PXMP4-202ENST00000344022 ERICH3Q5RHP9 1530 aa27.3■■□□□ 1.96
PXMP4-202ENST00000344022 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
PXMP4-202ENST00000344022 ARAP1Q96P48 1450 aa27.29■■□□□ 1.96
PXMP4-202ENST00000344022 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
PXMP4-202ENST00000344022 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
PXMP4-202ENST00000344022 NUP160Q12769 1436 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms