RNA–Protein interactions for RNA: ENST00000342055.9

RHD-202, Transcript of Rh blood group D antigen, humanhuman

TSL 1 (best) BASIC

Gene RHD, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHD-202ENST00000342055 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
RHD-202ENST00000342055 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
RHD-202ENST00000342055 ABCC9O60706 1549 aa29.22■■■□□ 2.27
RHD-202ENST00000342055 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
RHD-202ENST00000342055 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
RHD-202ENST00000342055 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
RHD-202ENST00000342055 NACADO15069 1562 aa28.47■■■□□ 2.15
RHD-202ENST00000342055 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
RHD-202ENST00000342055 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
RHD-202ENST00000342055 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
RHD-202ENST00000342055 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
RHD-202ENST00000342055 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
RHD-202ENST00000342055 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
RHD-202ENST00000342055 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
RHD-202ENST00000342055 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
RHD-202ENST00000342055 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
RHD-202ENST00000342055 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
RHD-202ENST00000342055 SMARCA4P51532 1647 aa26.67■■□□□ 1.86
RHD-202ENST00000342055 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
RHD-202ENST00000342055 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
RHD-202ENST00000342055 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
RHD-202ENST00000342055 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
RHD-202ENST00000342055 WIZO95785 1651 aa26.39■■□□□ 1.82
RHD-202ENST00000342055 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
RHD-202ENST00000342055 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
RHD-202ENST00000342055 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
RHD-202ENST00000342055 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
RHD-202ENST00000342055 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
RHD-202ENST00000342055 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
RHD-202ENST00000342055 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
RHD-202ENST00000342055 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
RHD-202ENST00000342055 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
RHD-202ENST00000342055 CADPSQ9ULU8 1353 aa25.54■■□□□ 1.68
RHD-202ENST00000342055 CFTRP13569 1480 aa25.51■■□□□ 1.67
RHD-202ENST00000342055 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
RHD-202ENST00000342055 NESP48681 1621 aa25.44■■□□□ 1.66
RHD-202ENST00000342055 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
RHD-202ENST00000342055 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
RHD-202ENST00000342055 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
RHD-202ENST00000342055 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
RHD-202ENST00000342055 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
RHD-202ENST00000342055 ERCC6Q03468 1493 aa25.18■■□□□ 1.62
RHD-202ENST00000342055 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
RHD-202ENST00000342055 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
RHD-202ENST00000342055 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
RHD-202ENST00000342055 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
RHD-202ENST00000342055 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
RHD-202ENST00000342055 CUX1P39880 1505 aa24.95■■□□□ 1.58
RHD-202ENST00000342055 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
RHD-202ENST00000342055 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
RHD-202ENST00000342055 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
RHD-202ENST00000342055 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
RHD-202ENST00000342055 TOP2BQ02880 1626 aa24.9■■□□□ 1.58
RHD-202ENST00000342055 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
RHD-202ENST00000342055 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
RHD-202ENST00000342055 WDR62O43379 1518 aa24.87■■□□□ 1.57
RHD-202ENST00000342055 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
RHD-202ENST00000342055 POLA1P09884 1462 aaPredicted RBP24.74■■□□□ 1.55
RHD-202ENST00000342055 SOGA1O94964 1423 aa24.68■■□□□ 1.54
RHD-202ENST00000342055 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
RHD-202ENST00000342055 CUX2O14529 1486 aa24.63■■□□□ 1.53
RHD-202ENST00000342055 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
RHD-202ENST00000342055 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
RHD-202ENST00000342055 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
RHD-202ENST00000342055 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
RHD-202ENST00000342055 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
RHD-202ENST00000342055 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
RHD-202ENST00000342055 EEA1Q15075 1411 aa24.44■■□□□ 1.5
RHD-202ENST00000342055 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
RHD-202ENST00000342055 FAM9AQ8IZU1 332 aaPredicted RBP24.43■■□□□ 1.5
RHD-202ENST00000342055 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
RHD-202ENST00000342055 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
RHD-202ENST00000342055 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
RHD-202ENST00000342055 ABCA5Q8WWZ7 1642 aa24.4■■□□□ 1.5
RHD-202ENST00000342055 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
RHD-202ENST00000342055 CSRNP3Q8WYN3 585 aa24.33■■□□□ 1.48
RHD-202ENST00000342055 GRIN2BQ13224 1484 aa24.31■■□□□ 1.48
RHD-202ENST00000342055 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
RHD-202ENST00000342055 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
RHD-202ENST00000342055 IGF1RP08069 1367 aa24.28■■□□□ 1.48
RHD-202ENST00000342055 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
RHD-202ENST00000342055 CUL7Q14999 1698 aa24.2■■□□□ 1.47
RHD-202ENST00000342055 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
RHD-202ENST00000342055 CARMIL1Q5VZK9 1371 aa24.18■■□□□ 1.46
RHD-202ENST00000342055 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
RHD-202ENST00000342055 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
RHD-202ENST00000342055 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
RHD-202ENST00000342055 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
RHD-202ENST00000342055 KIF21BO75037 1637 aa24.11■■□□□ 1.45
RHD-202ENST00000342055 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
RHD-202ENST00000342055 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
RHD-202ENST00000342055 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
RHD-202ENST00000342055 FBLN2P98095 1184 aa24.07■■□□□ 1.44
RHD-202ENST00000342055 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
RHD-202ENST00000342055 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
RHD-202ENST00000342055 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
RHD-202ENST00000342055 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
RHD-202ENST00000342055 CHD1O14646 1710 aa23.96■■□□□ 1.43
RHD-202ENST00000342055 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
RHD-202ENST00000342055 CTTNBP2Q8WZ74 1663 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms