RNA–Protein interactions for RNA: ENST00000340126.8

SP100-202, Transcript of SP100 nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP100, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-202ENST00000340126 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
SP100-202ENST00000340126 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
SP100-202ENST00000340126 ABCC9O60706 1549 aa19.97■□□□□ 0.79
SP100-202ENST00000340126 NACADO15069 1562 aa19.43■□□□□ 0.7
SP100-202ENST00000340126 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
SP100-202ENST00000340126 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
SP100-202ENST00000340126 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
SP100-202ENST00000340126 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
SP100-202ENST00000340126 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
SP100-202ENST00000340126 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
SP100-202ENST00000340126 SHROOM4Q9ULL8 1493 aa18.79■□□□□ 0.6
SP100-202ENST00000340126 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
SP100-202ENST00000340126 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
SP100-202ENST00000340126 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
SP100-202ENST00000340126 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
SP100-202ENST00000340126 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
SP100-202ENST00000340126 CC2D2AQ9P2K1 1620 aa18.16■□□□□ 0.5
SP100-202ENST00000340126 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
SP100-202ENST00000340126 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
SP100-202ENST00000340126 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
SP100-202ENST00000340126 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
SP100-202ENST00000340126 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
SP100-202ENST00000340126 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
SP100-202ENST00000340126 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
SP100-202ENST00000340126 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
SP100-202ENST00000340126 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
SP100-202ENST00000340126 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
SP100-202ENST00000340126 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
SP100-202ENST00000340126 WIZO95785 1651 aa17.54■□□□□ 0.4
SP100-202ENST00000340126 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
SP100-202ENST00000340126 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
SP100-202ENST00000340126 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
SP100-202ENST00000340126 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
SP100-202ENST00000340126 NESP48681 1621 aa17.27■□□□□ 0.35
SP100-202ENST00000340126 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
SP100-202ENST00000340126 CUX2O14529 1486 aa17.24■□□□□ 0.35
SP100-202ENST00000340126 CFTRP13569 1480 aa17.23■□□□□ 0.35
SP100-202ENST00000340126 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
SP100-202ENST00000340126 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
SP100-202ENST00000340126 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
SP100-202ENST00000340126 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
SP100-202ENST00000340126 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
SP100-202ENST00000340126 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.33
SP100-202ENST00000340126 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.33
SP100-202ENST00000340126 WDR62O43379 1518 aa17.06■□□□□ 0.32
SP100-202ENST00000340126 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
SP100-202ENST00000340126 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
SP100-202ENST00000340126 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
SP100-202ENST00000340126 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
SP100-202ENST00000340126 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
SP100-202ENST00000340126 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
SP100-202ENST00000340126 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
SP100-202ENST00000340126 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
SP100-202ENST00000340126 CUX1P39880 1505 aa16.67■□□□□ 0.26
SP100-202ENST00000340126 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
SP100-202ENST00000340126 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
SP100-202ENST00000340126 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
SP100-202ENST00000340126 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
SP100-202ENST00000340126 SOGA1O94964 1423 aa16.59■□□□□ 0.25
SP100-202ENST00000340126 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
SP100-202ENST00000340126 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.249e-6■■■■■ 50.1
SP100-202ENST00000340126 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
SP100-202ENST00000340126 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
SP100-202ENST00000340126 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
SP100-202ENST00000340126 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
SP100-202ENST00000340126 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
SP100-202ENST00000340126 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
SP100-202ENST00000340126 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
SP100-202ENST00000340126 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
SP100-202ENST00000340126 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
SP100-202ENST00000340126 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
SP100-202ENST00000340126 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
SP100-202ENST00000340126 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
SP100-202ENST00000340126 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
SP100-202ENST00000340126 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
SP100-202ENST00000340126 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
SP100-202ENST00000340126 CHD1O14646 1710 aa16.35■□□□□ 0.21
SP100-202ENST00000340126 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
SP100-202ENST00000340126 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
SP100-202ENST00000340126 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.2
SP100-202ENST00000340126 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
SP100-202ENST00000340126 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
SP100-202ENST00000340126 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
SP100-202ENST00000340126 CUL7Q14999 1698 aa16.22■□□□□ 0.19
SP100-202ENST00000340126 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
SP100-202ENST00000340126 NUP160Q12769 1436 aa16.19■□□□□ 0.18
SP100-202ENST00000340126 FBLN2P98095 1184 aa16.15■□□□□ 0.18
SP100-202ENST00000340126 IGF1RP08069 1367 aa16.15■□□□□ 0.18
SP100-202ENST00000340126 RIMBP3CA6NJZ7 1639 aa16.15■□□□□ 0.18
SP100-202ENST00000340126 RIMBP3BA6NNM3 1639 aa16.15■□□□□ 0.18
SP100-202ENST00000340126 RIMBP3Q9UFD9 1639 aa16.15■□□□□ 0.18
SP100-202ENST00000340126 ARHGEF11O15085 1522 aa16.14■□□□□ 0.17
SP100-202ENST00000340126 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
SP100-202ENST00000340126 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
SP100-202ENST00000340126 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
SP100-202ENST00000340126 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
SP100-202ENST00000340126 EEA1Q15075 1411 aa16.05■□□□□ 0.16
SP100-202ENST00000340126 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
SP100-202ENST00000340126 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.16
SP100-202ENST00000340126 ARAP1Q96P48 1450 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms