RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.36
SDCBP2-201ENST00000339987 CCDC180Q9P1Z9 1646 aa37.3■■■■□ 3.56
SDCBP2-201ENST00000339987 ABCC9O60706 1549 aa35.77■■■■□ 3.32
SDCBP2-201ENST00000339987 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
SDCBP2-201ENST00000339987 DCAF1Q9Y4B6 1507 aa35.04■■■■□ 3.2
SDCBP2-201ENST00000339987 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
SDCBP2-201ENST00000339987 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
SDCBP2-201ENST00000339987 NACADO15069 1562 aa34.9■■■■□ 3.18
SDCBP2-201ENST00000339987 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
SDCBP2-201ENST00000339987 SCRIBQ14160 1630 aa34.03■■■■□ 3.04
SDCBP2-201ENST00000339987 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
SDCBP2-201ENST00000339987 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
SDCBP2-201ENST00000339987 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
SDCBP2-201ENST00000339987 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.96
SDCBP2-201ENST00000339987 CECR2Q9BXF3 1484 aa32.82■■■□□ 2.84
SDCBP2-201ENST00000339987 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
SDCBP2-201ENST00000339987 EIF4G1Q04637 1599 aaKnown RBP32.72■■■□□ 2.83
SDCBP2-201ENST00000339987 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
SDCBP2-201ENST00000339987 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
SDCBP2-201ENST00000339987 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
SDCBP2-201ENST00000339987 RSF1Q96T23 1441 aaPredicted RBP32.45■■■□□ 2.78
SDCBP2-201ENST00000339987 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
SDCBP2-201ENST00000339987 PEG3Q9GZU2 1588 aa32.35■■■□□ 2.77
SDCBP2-201ENST00000339987 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
SDCBP2-201ENST00000339987 SMARCA2P51531 1590 aa32.3■■■□□ 2.76
SDCBP2-201ENST00000339987 WIZO95785 1651 aa32.24■■■□□ 2.75
SDCBP2-201ENST00000339987 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
SDCBP2-201ENST00000339987 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
SDCBP2-201ENST00000339987 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
SDCBP2-201ENST00000339987 BAZ1BQ9UIG0 1483 aaKnown RBP32.06■■■□□ 2.72
SDCBP2-201ENST00000339987 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
SDCBP2-201ENST00000339987 CCDC88BA6NC98 1476 aa31.57■■■□□ 2.64
SDCBP2-201ENST00000339987 CADPSQ9ULU8 1353 aa31.27■■■□□ 2.6
SDCBP2-201ENST00000339987 CFTRP13569 1480 aa31.24■■■□□ 2.59
SDCBP2-201ENST00000339987 LAMC3Q9Y6N6 1575 aa31.23■■■□□ 2.59
SDCBP2-201ENST00000339987 NESP48681 1621 aa31.16■■■□□ 2.58
SDCBP2-201ENST00000339987 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
SDCBP2-201ENST00000339987 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
SDCBP2-201ENST00000339987 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
SDCBP2-201ENST00000339987 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
SDCBP2-201ENST00000339987 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
SDCBP2-201ENST00000339987 ERCC6Q03468 1493 aa30.78■■■□□ 2.52
SDCBP2-201ENST00000339987 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
SDCBP2-201ENST00000339987 ABCC8Q09428 1581 aa30.6■■■□□ 2.49
SDCBP2-201ENST00000339987 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
SDCBP2-201ENST00000339987 WRNQ14191 1432 aaPredicted RBP eCLIP30.57■■■□□ 2.48
SDCBP2-201ENST00000339987 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
SDCBP2-201ENST00000339987 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
SDCBP2-201ENST00000339987 WDR62O43379 1518 aa30.51■■■□□ 2.48
SDCBP2-201ENST00000339987 CUX1P39880 1505 aa30.51■■■□□ 2.48
SDCBP2-201ENST00000339987 TOPBP1Q92547 1522 aa30.5■■■□□ 2.47
SDCBP2-201ENST00000339987 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
SDCBP2-201ENST00000339987 TOP2BQ02880 1626 aa30.45■■■□□ 2.46
SDCBP2-201ENST00000339987 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.46
SDCBP2-201ENST00000339987 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
SDCBP2-201ENST00000339987 DNAJC5Q9H3Z4 198 aa30.31■■■□□ 2.44
SDCBP2-201ENST00000339987 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
SDCBP2-201ENST00000339987 POLA1P09884 1462 aaPredicted RBP30.28■■■□□ 2.44
SDCBP2-201ENST00000339987 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
SDCBP2-201ENST00000339987 CUX2O14529 1486 aa30.26■■■□□ 2.43
SDCBP2-201ENST00000339987 SOGA1O94964 1423 aa30.16■■■□□ 2.42
SDCBP2-201ENST00000339987 IFT140Q96RY7 1462 aa30.14■■■□□ 2.42
SDCBP2-201ENST00000339987 TARBP1Q13395 1621 aaKnown RBP30.12■■■□□ 2.41
SDCBP2-201ENST00000339987 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
SDCBP2-201ENST00000339987 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
SDCBP2-201ENST00000339987 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
SDCBP2-201ENST00000339987 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
SDCBP2-201ENST00000339987 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.37
SDCBP2-201ENST00000339987 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
SDCBP2-201ENST00000339987 TDRD9Q8NDG6 1382 aaKnown RBP29.88■■■□□ 2.37
SDCBP2-201ENST00000339987 EIF4G3O43432 1585 aaKnown RBP29.85■■■□□ 2.37
SDCBP2-201ENST00000339987 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.37
SDCBP2-201ENST00000339987 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
SDCBP2-201ENST00000339987 EEA1Q15075 1411 aa29.8■■■□□ 2.36
SDCBP2-201ENST00000339987 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
SDCBP2-201ENST00000339987 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
SDCBP2-201ENST00000339987 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
SDCBP2-201ENST00000339987 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
SDCBP2-201ENST00000339987 IGF1RP08069 1367 aa29.67■■■□□ 2.34
SDCBP2-201ENST00000339987 CSRNP3Q8WYN3 585 aa29.61■■■□□ 2.33
SDCBP2-201ENST00000339987 MAGI1Q96QZ7 1491 aaPredicted RBP29.61■■■□□ 2.33
SDCBP2-201ENST00000339987 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
SDCBP2-201ENST00000339987 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
SDCBP2-201ENST00000339987 CUL7Q14999 1698 aa29.58■■■□□ 2.33
SDCBP2-201ENST00000339987 ADAMTS12P58397 1594 aa29.54■■■□□ 2.32
SDCBP2-201ENST00000339987 FHAD1B1AJZ9 1412 aa29.52■■■□□ 2.32
SDCBP2-201ENST00000339987 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
SDCBP2-201ENST00000339987 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
SDCBP2-201ENST00000339987 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
SDCBP2-201ENST00000339987 KIF21BO75037 1637 aa29.42■■■□□ 2.3
SDCBP2-201ENST00000339987 RAPGEF2Q9Y4G8 1499 aa29.42■■■□□ 2.3
SDCBP2-201ENST00000339987 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
SDCBP2-201ENST00000339987 CHMP7Q8WUX9 453 aaPredicted RBP29.36■■■□□ 2.29
SDCBP2-201ENST00000339987 CHD1O14646 1710 aa29.33■■■□□ 2.29
SDCBP2-201ENST00000339987 FBLN2P98095 1184 aa29.29■■■□□ 2.28
SDCBP2-201ENST00000339987 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
SDCBP2-201ENST00000339987 NUP160Q12769 1436 aa29.21■■■□□ 2.27
SDCBP2-201ENST00000339987 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
SDCBP2-201ENST00000339987 EHMT2Q96KQ7 1210 aa29.11■■■□□ 2.25
SDCBP2-201ENST00000339987 CTTNBP2Q8WZ74 1663 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms