RNA–Protein interactions for RNA: ENST00000337404.8

SOD2-201, Transcript of superoxide dismutase 2, humanhuman

TSL 2 BASIC

Gene SOD2, Length 991 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-201ENST00000337404 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
SOD2-201ENST00000337404 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
SOD2-201ENST00000337404 ABCC9O60706 1549 aa36.56■■■■□ 3.44
SOD2-201ENST00000337404 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
SOD2-201ENST00000337404 NACADO15069 1562 aa35.27■■■■□ 3.24
SOD2-201ENST00000337404 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
SOD2-201ENST00000337404 RB1CC1Q8TDY2 1594 aa35.24■■■■□ 3.23
SOD2-201ENST00000337404 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
SOD2-201ENST00000337404 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
SOD2-201ENST00000337404 PABPN1Q86U42 306 aaKnown RBP eCLIP34.25■■■■□ 3.07
SOD2-201ENST00000337404 UNC13AQ9UPW8 1703 aa34.24■■■■□ 3.07
SOD2-201ENST00000337404 SCRIBQ14160 1630 aa34.16■■■■□ 3.06
SOD2-201ENST00000337404 BICRAQ9NZM4 1560 aa34.13■■■■□ 3.05
SOD2-201ENST00000337404 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
SOD2-201ENST00000337404 DNAJC5BQ9UF47 199 aa33.49■■■□□ 2.95
SOD2-201ENST00000337404 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
SOD2-201ENST00000337404 CC2D2AQ9P2K1 1620 aa33.04■■■□□ 2.88
SOD2-201ENST00000337404 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
SOD2-201ENST00000337404 BAZ1AQ9NRL2 1556 aaPredicted RBP32.77■■■□□ 2.84
SOD2-201ENST00000337404 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
SOD2-201ENST00000337404 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
SOD2-201ENST00000337404 ATAD2BQ9ULI0 1458 aa32.6■■■□□ 2.81
SOD2-201ENST00000337404 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
SOD2-201ENST00000337404 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
SOD2-201ENST00000337404 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
SOD2-201ENST00000337404 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
SOD2-201ENST00000337404 RSF1Q96T23 1441 aaPredicted RBP32.32■■■□□ 2.76
SOD2-201ENST00000337404 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
SOD2-201ENST00000337404 WIZO95785 1651 aa32.15■■■□□ 2.74
SOD2-201ENST00000337404 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
SOD2-201ENST00000337404 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
SOD2-201ENST00000337404 NESP48681 1621 aa31.66■■■□□ 2.66
SOD2-201ENST00000337404 LAMC3Q9Y6N6 1575 aa31.63■■■□□ 2.65
SOD2-201ENST00000337404 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
SOD2-201ENST00000337404 CCDC88BA6NC98 1476 aa31.57■■■□□ 2.64
SOD2-201ENST00000337404 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
SOD2-201ENST00000337404 PDS5BQ9NTI5 1447 aa31.5■■■□□ 2.63
SOD2-201ENST00000337404 CFTRP13569 1480 aa31.48■■■□□ 2.63
SOD2-201ENST00000337404 FANCD2Q9BXW9 1451 aa31.24■■■□□ 2.59
SOD2-201ENST00000337404 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
SOD2-201ENST00000337404 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
SOD2-201ENST00000337404 CUX2O14529 1486 aa31.17■■■□□ 2.58
SOD2-201ENST00000337404 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
SOD2-201ENST00000337404 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
SOD2-201ENST00000337404 PRDM2Q13029 1718 aa31.02■■■□□ 2.56
SOD2-201ENST00000337404 WDR62O43379 1518 aa30.97■■■□□ 2.55
SOD2-201ENST00000337404 URB2Q14146 1524 aaKnown RBP30.89■■■□□ 2.54
SOD2-201ENST00000337404 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
SOD2-201ENST00000337404 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
SOD2-201ENST00000337404 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.5
SOD2-201ENST00000337404 IFT140Q96RY7 1462 aa30.56■■■□□ 2.48
SOD2-201ENST00000337404 CUX1P39880 1505 aa30.54■■■□□ 2.48
SOD2-201ENST00000337404 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
SOD2-201ENST00000337404 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
SOD2-201ENST00000337404 SOGA1O94964 1423 aa30.43■■■□□ 2.46
SOD2-201ENST00000337404 FGD5Q6ZNL6 1462 aa30.43■■■□□ 2.46
SOD2-201ENST00000337404 RAD54L2Q9Y4B4 1467 aa30.35■■■□□ 2.45
SOD2-201ENST00000337404 TARBP1Q13395 1621 aaKnown RBP30.35■■■□□ 2.45
SOD2-201ENST00000337404 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
SOD2-201ENST00000337404 TOP2BQ02880 1626 aa30.31■■■□□ 2.44
SOD2-201ENST00000337404 SYNJ1O43426 1573 aa30.28■■■□□ 2.44
SOD2-201ENST00000337404 BIVM-ERCC5R4GMW8 1640 aa30.27■■■□□ 2.44
SOD2-201ENST00000337404 TDRD9Q8NDG6 1382 aaKnown RBP30.23■■■□□ 2.43
SOD2-201ENST00000337404 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.431e-6■■■■■ 33.2
SOD2-201ENST00000337404 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
SOD2-201ENST00000337404 WDR97A6NE52 1622 aa30.17■■■□□ 2.42
SOD2-201ENST00000337404 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
SOD2-201ENST00000337404 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
SOD2-201ENST00000337404 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
SOD2-201ENST00000337404 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
SOD2-201ENST00000337404 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
SOD2-201ENST00000337404 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
SOD2-201ENST00000337404 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
SOD2-201ENST00000337404 SNAPC4Q5SXM2 1469 aa29.92■■■□□ 2.38
SOD2-201ENST00000337404 TRIM41Q8WV44 630 aa29.91■■■□□ 2.38
SOD2-201ENST00000337404 FBLN2P98095 1184 aa29.88■■■□□ 2.37
SOD2-201ENST00000337404 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
SOD2-201ENST00000337404 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
SOD2-201ENST00000337404 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
SOD2-201ENST00000337404 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
SOD2-201ENST00000337404 PBRM1Q86U86 1689 aa29.8■■■□□ 2.36
SOD2-201ENST00000337404 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
SOD2-201ENST00000337404 IGF1RP08069 1367 aa29.73■■■□□ 2.35
SOD2-201ENST00000337404 CHD1O14646 1710 aa29.69■■■□□ 2.34
SOD2-201ENST00000337404 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
SOD2-201ENST00000337404 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
SOD2-201ENST00000337404 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
SOD2-201ENST00000337404 CARMIL1Q5VZK9 1371 aa29.54■■■□□ 2.32
SOD2-201ENST00000337404 RUSC2Q8N2Y8 1516 aa29.54■■■□□ 2.32
SOD2-201ENST00000337404 NUP160Q12769 1436 aa29.51■■■□□ 2.31
SOD2-201ENST00000337404 CUL7Q14999 1698 aa29.5■■■□□ 2.31
SOD2-201ENST00000337404 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
SOD2-201ENST00000337404 CEP170Q5SW79 1584 aa29.4■■■□□ 2.3
SOD2-201ENST00000337404 EEA1Q15075 1411 aa29.39■■■□□ 2.3
SOD2-201ENST00000337404 ARHGEF11O15085 1522 aa29.37■■■□□ 2.29
SOD2-201ENST00000337404 CSRNP3Q8WYN3 585 aa29.37■■■□□ 2.29
SOD2-201ENST00000337404 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
SOD2-201ENST00000337404 RIMBP3CA6NJZ7 1639 aa29.3■■■□□ 2.28
SOD2-201ENST00000337404 RIMBP3BA6NNM3 1639 aa29.3■■■□□ 2.28
SOD2-201ENST00000337404 RIMBP3Q9UFD9 1639 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms