RNA–Protein interactions for RNA: ENST00000335352.8

SMIM29-201, Transcript of small integral membrane protein 29, humanhuman

TSL 2 BASIC

Gene SMIM29, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-201ENST00000335352 NISCHQ9Y2I1 1504 aa43.11■■■■■ 4.49
SMIM29-201ENST00000335352 CCDC180Q9P1Z9 1646 aa38.67■■■■□ 3.78
SMIM29-201ENST00000335352 ABCC9O60706 1549 aa38.44■■■■□ 3.74
SMIM29-201ENST00000335352 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
SMIM29-201ENST00000335352 NACADO15069 1562 aa36.52■■■■□ 3.44
SMIM29-201ENST00000335352 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
SMIM29-201ENST00000335352 MYO15BQ96JP2 1530 aa36.05■■■■□ 3.36
SMIM29-201ENST00000335352 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
SMIM29-201ENST00000335352 ZCCHC6Q5VYS8 1495 aaKnown RBP35.78■■■■□ 3.32
SMIM29-201ENST00000335352 UNC13AQ9UPW8 1703 aa35.76■■■■□ 3.31
SMIM29-201ENST00000335352 DNAJC5BQ9UF47 199 aa35.72■■■■□ 3.31
SMIM29-201ENST00000335352 DCAF1Q9Y4B6 1507 aa35.65■■■■□ 3.3
SMIM29-201ENST00000335352 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.27
SMIM29-201ENST00000335352 SHROOM4Q9ULL8 1493 aa35.24■■■■□ 3.23
SMIM29-201ENST00000335352 SCRIBQ14160 1630 aa35.22■■■■□ 3.23
SMIM29-201ENST00000335352 CC2D2AQ9P2K1 1620 aa34.72■■■■□ 3.15
SMIM29-201ENST00000335352 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.15
SMIM29-201ENST00000335352 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
SMIM29-201ENST00000335352 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
SMIM29-201ENST00000335352 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
SMIM29-201ENST00000335352 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
SMIM29-201ENST00000335352 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
SMIM29-201ENST00000335352 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.96
SMIM29-201ENST00000335352 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
SMIM29-201ENST00000335352 BAZ1BQ9UIG0 1483 aaKnown RBP33.34■■■□□ 2.93
SMIM29-201ENST00000335352 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
SMIM29-201ENST00000335352 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
SMIM29-201ENST00000335352 MROH2BQ7Z745 1585 aa33.18■■■□□ 2.9
SMIM29-201ENST00000335352 CUX2O14529 1486 aa33.12■■■□□ 2.89
SMIM29-201ENST00000335352 NESP48681 1621 aa33.02■■■□□ 2.88
SMIM29-201ENST00000335352 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
SMIM29-201ENST00000335352 DNAJC5Q9H3Z4 198 aa32.8■■■□□ 2.84
SMIM29-201ENST00000335352 WIZO95785 1651 aa32.79■■■□□ 2.84
SMIM29-201ENST00000335352 PDS5BQ9NTI5 1447 aa32.77■■■□□ 2.84
SMIM29-201ENST00000335352 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
SMIM29-201ENST00000335352 CADPSQ9ULU8 1353 aa32.66■■■□□ 2.82
SMIM29-201ENST00000335352 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
SMIM29-201ENST00000335352 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
SMIM29-201ENST00000335352 TOP2AP11388 1531 aaKnown RBP32.47■■■□□ 2.79
SMIM29-201ENST00000335352 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
SMIM29-201ENST00000335352 CEP164Q9UPV0 1460 aa32.37■■■□□ 2.77
SMIM29-201ENST00000335352 WDR62O43379 1518 aa32.31■■■□□ 2.76
SMIM29-201ENST00000335352 CFTRP13569 1480 aa32.31■■■□□ 2.76
SMIM29-201ENST00000335352 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
SMIM29-201ENST00000335352 CCDC88BA6NC98 1476 aa32.04■■■□□ 2.72
SMIM29-201ENST00000335352 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
SMIM29-201ENST00000335352 URB2Q14146 1524 aaKnown RBP31.97■■■□□ 2.71
SMIM29-201ENST00000335352 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
SMIM29-201ENST00000335352 IFT140Q96RY7 1462 aa31.7■■■□□ 2.66
SMIM29-201ENST00000335352 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
SMIM29-201ENST00000335352 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
SMIM29-201ENST00000335352 DNMBPQ6XZF7 1577 aa31.63■■■□□ 2.65
SMIM29-201ENST00000335352 ZNF608Q9ULD9 1512 aaPredicted RBP31.54■■■□□ 2.64
SMIM29-201ENST00000335352 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
SMIM29-201ENST00000335352 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
SMIM29-201ENST00000335352 POLA1P09884 1462 aaPredicted RBP31.38■■■□□ 2.61
SMIM29-201ENST00000335352 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
SMIM29-201ENST00000335352 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
SMIM29-201ENST00000335352 AQRO60306 1485 aaKnown RBP eCLIP31.29■■■□□ 2.62e-7■■■■■ 56.2
SMIM29-201ENST00000335352 SOGA1O94964 1423 aa31.26■■■□□ 2.6
SMIM29-201ENST00000335352 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
SMIM29-201ENST00000335352 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
SMIM29-201ENST00000335352 CUX1P39880 1505 aa31.19■■■□□ 2.58
SMIM29-201ENST00000335352 WDR97A6NE52 1622 aa31.16■■■□□ 2.58
SMIM29-201ENST00000335352 FBLN2P98095 1184 aa31.16■■■□□ 2.58
SMIM29-201ENST00000335352 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
SMIM29-201ENST00000335352 CHD1O14646 1710 aa31.15■■■□□ 2.58
SMIM29-201ENST00000335352 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
SMIM29-201ENST00000335352 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
SMIM29-201ENST00000335352 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
SMIM29-201ENST00000335352 ARHGEF11O15085 1522 aa31.08■■■□□ 2.57
SMIM29-201ENST00000335352 SNAPC4Q5SXM2 1469 aa31.03■■■□□ 2.56
SMIM29-201ENST00000335352 GRIN2BQ13224 1484 aa31.01■■■□□ 2.55
SMIM29-201ENST00000335352 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
SMIM29-201ENST00000335352 CHMP7Q8WUX9 453 aaPredicted RBP30.96■■■□□ 2.55
SMIM29-201ENST00000335352 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
SMIM29-201ENST00000335352 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
SMIM29-201ENST00000335352 SYNJ1O43426 1573 aa30.88■■■□□ 2.53
SMIM29-201ENST00000335352 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
SMIM29-201ENST00000335352 WRNQ14191 1432 aaPredicted RBP eCLIP30.86■■■□□ 2.53
SMIM29-201ENST00000335352 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
SMIM29-201ENST00000335352 CYB5RLQ6IPT4 315 aa30.85■■■□□ 2.53
SMIM29-201ENST00000335352 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
SMIM29-201ENST00000335352 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
SMIM29-201ENST00000335352 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
SMIM29-201ENST00000335352 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.52
SMIM29-201ENST00000335352 ARAP1Q96P48 1450 aa30.76■■■□□ 2.52
SMIM29-201ENST00000335352 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
SMIM29-201ENST00000335352 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
SMIM29-201ENST00000335352 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
SMIM29-201ENST00000335352 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
SMIM29-201ENST00000335352 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
SMIM29-201ENST00000335352 NUP160Q12769 1436 aa30.44■■■□□ 2.46
SMIM29-201ENST00000335352 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
SMIM29-201ENST00000335352 SHROOM2Q13796 1616 aa30.27■■■□□ 2.44
SMIM29-201ENST00000335352 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
SMIM29-201ENST00000335352 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
SMIM29-201ENST00000335352 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
SMIM29-201ENST00000335352 CUL7Q14999 1698 aa30.15■■■□□ 2.42
SMIM29-201ENST00000335352 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms