RNA–Protein interactions for RNA: ENST00000335123.3

LCE1A-201, Transcript of late cornified envelope 1A, humanhuman

APPRIS P1 BASIC

Gene LCE1A, Length 422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1A-201ENST00000335123 NISCHQ9Y2I1 1504 aa39.2■■■■□ 3.87
LCE1A-201ENST00000335123 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
LCE1A-201ENST00000335123 ABCC9O60706 1549 aa33.88■■■■□ 3.01
LCE1A-201ENST00000335123 DCAF8L2P0C7V8 631 aa32.71■■■□□ 2.83
LCE1A-201ENST00000335123 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
LCE1A-201ENST00000335123 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
LCE1A-201ENST00000335123 NACADO15069 1562 aa32.58■■■□□ 2.81
LCE1A-201ENST00000335123 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
LCE1A-201ENST00000335123 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
LCE1A-201ENST00000335123 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
LCE1A-201ENST00000335123 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
LCE1A-201ENST00000335123 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.67
LCE1A-201ENST00000335123 BICRAQ9NZM4 1560 aa31.68■■■□□ 2.66
LCE1A-201ENST00000335123 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
LCE1A-201ENST00000335123 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
LCE1A-201ENST00000335123 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
LCE1A-201ENST00000335123 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
LCE1A-201ENST00000335123 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
LCE1A-201ENST00000335123 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
LCE1A-201ENST00000335123 BAZ1AQ9NRL2 1556 aaPredicted RBP30.34■■■□□ 2.45
LCE1A-201ENST00000335123 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
LCE1A-201ENST00000335123 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
LCE1A-201ENST00000335123 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
LCE1A-201ENST00000335123 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
LCE1A-201ENST00000335123 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
LCE1A-201ENST00000335123 WIZO95785 1651 aa29.99■■■□□ 2.39
LCE1A-201ENST00000335123 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
LCE1A-201ENST00000335123 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
LCE1A-201ENST00000335123 BAZ1BQ9UIG0 1483 aaKnown RBP29.92■■■□□ 2.38
LCE1A-201ENST00000335123 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
LCE1A-201ENST00000335123 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
LCE1A-201ENST00000335123 NESP48681 1621 aa29.42■■■□□ 2.3
LCE1A-201ENST00000335123 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
LCE1A-201ENST00000335123 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
LCE1A-201ENST00000335123 LAMC3Q9Y6N6 1575 aa29.25■■■□□ 2.27
LCE1A-201ENST00000335123 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
LCE1A-201ENST00000335123 ERCC6Q03468 1493 aa29.11■■■□□ 2.25
LCE1A-201ENST00000335123 CFTRP13569 1480 aa29.1■■■□□ 2.25
LCE1A-201ENST00000335123 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
LCE1A-201ENST00000335123 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
LCE1A-201ENST00000335123 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
LCE1A-201ENST00000335123 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
LCE1A-201ENST00000335123 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
LCE1A-201ENST00000335123 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
LCE1A-201ENST00000335123 MRC2Q9UBG0 1479 aa28.75■■■□□ 2.19
LCE1A-201ENST00000335123 CUX2O14529 1486 aa28.69■■■□□ 2.18
LCE1A-201ENST00000335123 WDR62O43379 1518 aa28.66■■■□□ 2.18
LCE1A-201ENST00000335123 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
LCE1A-201ENST00000335123 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
LCE1A-201ENST00000335123 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
LCE1A-201ENST00000335123 CUX1P39880 1505 aa28.38■■■□□ 2.13
LCE1A-201ENST00000335123 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
LCE1A-201ENST00000335123 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
LCE1A-201ENST00000335123 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
LCE1A-201ENST00000335123 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
LCE1A-201ENST00000335123 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
LCE1A-201ENST00000335123 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
LCE1A-201ENST00000335123 RAD54L2Q9Y4B4 1467 aa28.19■■■□□ 2.1
LCE1A-201ENST00000335123 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
LCE1A-201ENST00000335123 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
LCE1A-201ENST00000335123 ZNF608Q9ULD9 1512 aaPredicted RBP28.17■■■□□ 2.1
LCE1A-201ENST00000335123 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
LCE1A-201ENST00000335123 SOGA1O94964 1423 aa28.12■■■□□ 2.09
LCE1A-201ENST00000335123 EIF4G3O43432 1585 aaKnown RBP28.04■■■□□ 2.08
LCE1A-201ENST00000335123 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
LCE1A-201ENST00000335123 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.07
LCE1A-201ENST00000335123 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
LCE1A-201ENST00000335123 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
LCE1A-201ENST00000335123 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
LCE1A-201ENST00000335123 TRIM41Q8WV44 630 aa27.81■■■□□ 2.04
LCE1A-201ENST00000335123 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
LCE1A-201ENST00000335123 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
LCE1A-201ENST00000335123 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
LCE1A-201ENST00000335123 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
LCE1A-201ENST00000335123 CHD1O14646 1710 aa27.67■■■□□ 2.02
LCE1A-201ENST00000335123 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
LCE1A-201ENST00000335123 FBLN2P98095 1184 aa27.6■■■□□ 2.01
LCE1A-201ENST00000335123 ERICH3Q5RHP9 1530 aa27.58■■■□□ 2.01
LCE1A-201ENST00000335123 KIF27Q86VH2 1401 aa27.58■■■□□ 2
LCE1A-201ENST00000335123 ADAMTS12P58397 1594 aa27.56■■■□□ 2
LCE1A-201ENST00000335123 SYNJ2O15056 1496 aa27.55■■■□□ 2
LCE1A-201ENST00000335123 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
LCE1A-201ENST00000335123 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
LCE1A-201ENST00000335123 OSCARQ8IYS5 282 aa27.54■■■□□ 2
LCE1A-201ENST00000335123 CHMP7Q8WUX9 453 aaPredicted RBP27.51■■□□□ 1.99
LCE1A-201ENST00000335123 IGF1RP08069 1367 aa27.48■■□□□ 1.99
LCE1A-201ENST00000335123 FHAD1B1AJZ9 1412 aa27.47■■□□□ 1.99
LCE1A-201ENST00000335123 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
LCE1A-201ENST00000335123 CUL7Q14999 1698 aa27.39■■□□□ 1.97
LCE1A-201ENST00000335123 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
LCE1A-201ENST00000335123 CEP170Q5SW79 1584 aa27.33■■□□□ 1.97
LCE1A-201ENST00000335123 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
LCE1A-201ENST00000335123 NUP160Q12769 1436 aa27.28■■□□□ 1.96
LCE1A-201ENST00000335123 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
LCE1A-201ENST00000335123 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
LCE1A-201ENST00000335123 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
LCE1A-201ENST00000335123 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
LCE1A-201ENST00000335123 RAPGEF2Q9Y4G8 1499 aa27.17■■□□□ 1.94
LCE1A-201ENST00000335123 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
LCE1A-201ENST00000335123 EEA1Q15075 1411 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms