RNA–Protein interactions for RNA: ENST00000334379.10

TRMT11-201, Transcript of tRNA methyltransferase 11 homolog, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRMT11, Length 1,565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT11-201ENST00000334379 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
TRMT11-201ENST00000334379 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
TRMT11-201ENST00000334379 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
TRMT11-201ENST00000334379 ABCC9O60706 1549 aa28.41■■■□□ 2.14
TRMT11-201ENST00000334379 DCAF1Q9Y4B6 1507 aa28.39■■■□□ 2.14
TRMT11-201ENST00000334379 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
TRMT11-201ENST00000334379 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
TRMT11-201ENST00000334379 NACADO15069 1562 aa27.99■■■□□ 2.07
TRMT11-201ENST00000334379 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
TRMT11-201ENST00000334379 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
TRMT11-201ENST00000334379 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
TRMT11-201ENST00000334379 UNC13AQ9UPW8 1703 aa27.12■■□□□ 1.93
TRMT11-201ENST00000334379 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
TRMT11-201ENST00000334379 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRMT11-201ENST00000334379 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
TRMT11-201ENST00000334379 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
TRMT11-201ENST00000334379 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
TRMT11-201ENST00000334379 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
TRMT11-201ENST00000334379 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
TRMT11-201ENST00000334379 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
TRMT11-201ENST00000334379 WIZO95785 1651 aa26.16■■□□□ 1.78
TRMT11-201ENST00000334379 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
TRMT11-201ENST00000334379 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
TRMT11-201ENST00000334379 SMARCA2P51531 1590 aa26■■□□□ 1.75
TRMT11-201ENST00000334379 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
TRMT11-201ENST00000334379 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
TRMT11-201ENST00000334379 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
TRMT11-201ENST00000334379 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
TRMT11-201ENST00000334379 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
TRMT11-201ENST00000334379 CC2D2AQ9P2K1 1620 aa25.75■■□□□ 1.71
TRMT11-201ENST00000334379 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
TRMT11-201ENST00000334379 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
TRMT11-201ENST00000334379 CFTRP13569 1480 aa25.18■■□□□ 1.62
TRMT11-201ENST00000334379 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
TRMT11-201ENST00000334379 CADPSQ9ULU8 1353 aa25.12■■□□□ 1.61
TRMT11-201ENST00000334379 PRDM2Q13029 1718 aa25.05■■□□□ 1.6
TRMT11-201ENST00000334379 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
TRMT11-201ENST00000334379 ABCC8Q09428 1581 aa25■■□□□ 1.59
TRMT11-201ENST00000334379 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
TRMT11-201ENST00000334379 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
TRMT11-201ENST00000334379 NESP48681 1621 aa24.87■■□□□ 1.57
TRMT11-201ENST00000334379 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
TRMT11-201ENST00000334379 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
TRMT11-201ENST00000334379 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
TRMT11-201ENST00000334379 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
TRMT11-201ENST00000334379 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
TRMT11-201ENST00000334379 CUX1P39880 1505 aa24.71■■□□□ 1.55
TRMT11-201ENST00000334379 CEP164Q9UPV0 1460 aa24.71■■□□□ 1.55
TRMT11-201ENST00000334379 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
TRMT11-201ENST00000334379 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
TRMT11-201ENST00000334379 EEA1Q15075 1411 aa24.55■■□□□ 1.52
TRMT11-201ENST00000334379 TOPBP1Q92547 1522 aa24.53■■□□□ 1.52
TRMT11-201ENST00000334379 SOGA1O94964 1423 aa24.5■■□□□ 1.51
TRMT11-201ENST00000334379 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
TRMT11-201ENST00000334379 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
TRMT11-201ENST00000334379 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
TRMT11-201ENST00000334379 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
TRMT11-201ENST00000334379 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
TRMT11-201ENST00000334379 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
TRMT11-201ENST00000334379 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.49
TRMT11-201ENST00000334379 WDR62O43379 1518 aa24.35■■□□□ 1.49
TRMT11-201ENST00000334379 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
TRMT11-201ENST00000334379 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
TRMT11-201ENST00000334379 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
TRMT11-201ENST00000334379 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
TRMT11-201ENST00000334379 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
TRMT11-201ENST00000334379 CUX2O14529 1486 aa24.28■■□□□ 1.48
TRMT11-201ENST00000334379 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
TRMT11-201ENST00000334379 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
TRMT11-201ENST00000334379 KIF21BO75037 1637 aa24.2■■□□□ 1.46
TRMT11-201ENST00000334379 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
TRMT11-201ENST00000334379 GOLGA3Q08378 1498 aa24.16■■□□□ 1.46
TRMT11-201ENST00000334379 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
TRMT11-201ENST00000334379 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
TRMT11-201ENST00000334379 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
TRMT11-201ENST00000334379 IGF1RP08069 1367 aa24.1■■□□□ 1.45
TRMT11-201ENST00000334379 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
TRMT11-201ENST00000334379 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
TRMT11-201ENST00000334379 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
TRMT11-201ENST00000334379 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
TRMT11-201ENST00000334379 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
TRMT11-201ENST00000334379 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
TRMT11-201ENST00000334379 CUL7Q14999 1698 aa24.01■■□□□ 1.43
TRMT11-201ENST00000334379 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
TRMT11-201ENST00000334379 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
TRMT11-201ENST00000334379 ZNF608Q9ULD9 1512 aaPredicted RBP23.93■■□□□ 1.42
TRMT11-201ENST00000334379 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.422e-7■■■■■ 121.7
TRMT11-201ENST00000334379 PBRM1Q86U86 1689 aa23.93■■□□□ 1.42
TRMT11-201ENST00000334379 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
TRMT11-201ENST00000334379 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
TRMT11-201ENST00000334379 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
TRMT11-201ENST00000334379 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
TRMT11-201ENST00000334379 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
TRMT11-201ENST00000334379 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
TRMT11-201ENST00000334379 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
TRMT11-201ENST00000334379 CLIP1P30622 1438 aa23.73■■□□□ 1.39
TRMT11-201ENST00000334379 CTTNBP2Q8WZ74 1663 aa23.67■■□□□ 1.38
TRMT11-201ENST00000334379 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
TRMT11-201ENST00000334379 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
TRMT11-201ENST00000334379 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms