RNA–Protein interactions for RNA: ENST00000334350.6

MT1F-201, Transcript of metallothionein 1F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MT1F, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT1F-201ENST00000334350 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
MT1F-201ENST00000334350 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
MT1F-201ENST00000334350 ABCC9O60706 1549 aa25.32■■□□□ 1.64
MT1F-201ENST00000334350 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
MT1F-201ENST00000334350 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
MT1F-201ENST00000334350 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
MT1F-201ENST00000334350 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
MT1F-201ENST00000334350 NACADO15069 1562 aa24.66■■□□□ 1.54
MT1F-201ENST00000334350 RB1CC1Q8TDY2 1594 aa24.43■■□□□ 1.5
MT1F-201ENST00000334350 SHROOM4Q9ULL8 1493 aa24.22■■□□□ 1.47
MT1F-201ENST00000334350 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
MT1F-201ENST00000334350 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
MT1F-201ENST00000334350 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
MT1F-201ENST00000334350 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
MT1F-201ENST00000334350 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
MT1F-201ENST00000334350 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
MT1F-201ENST00000334350 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
MT1F-201ENST00000334350 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
MT1F-201ENST00000334350 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
MT1F-201ENST00000334350 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
MT1F-201ENST00000334350 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
MT1F-201ENST00000334350 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
MT1F-201ENST00000334350 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
MT1F-201ENST00000334350 WIZO95785 1651 aa22.9■■□□□ 1.26
MT1F-201ENST00000334350 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
MT1F-201ENST00000334350 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
MT1F-201ENST00000334350 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
MT1F-201ENST00000334350 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
MT1F-201ENST00000334350 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
MT1F-201ENST00000334350 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
MT1F-201ENST00000334350 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
MT1F-201ENST00000334350 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.2
MT1F-201ENST00000334350 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
MT1F-201ENST00000334350 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
MT1F-201ENST00000334350 CFTRP13569 1480 aa22.2■■□□□ 1.14
MT1F-201ENST00000334350 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
MT1F-201ENST00000334350 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
MT1F-201ENST00000334350 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
MT1F-201ENST00000334350 NESP48681 1621 aa21.92■■□□□ 1.1
MT1F-201ENST00000334350 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
MT1F-201ENST00000334350 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
MT1F-201ENST00000334350 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
MT1F-201ENST00000334350 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
MT1F-201ENST00000334350 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
MT1F-201ENST00000334350 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
MT1F-201ENST00000334350 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
MT1F-201ENST00000334350 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
MT1F-201ENST00000334350 CUX1P39880 1505 aa21.68■■□□□ 1.06
MT1F-201ENST00000334350 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
MT1F-201ENST00000334350 EEA1Q15075 1411 aa21.63■■□□□ 1.05
MT1F-201ENST00000334350 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
MT1F-201ENST00000334350 CUX2O14529 1486 aa21.58■■□□□ 1.04
MT1F-201ENST00000334350 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
MT1F-201ENST00000334350 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
MT1F-201ENST00000334350 CSRNP3Q8WYN3 585 aa21.55■■□□□ 1.04
MT1F-201ENST00000334350 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
MT1F-201ENST00000334350 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
MT1F-201ENST00000334350 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
MT1F-201ENST00000334350 SOGA1O94964 1423 aa21.52■■□□□ 1.04
MT1F-201ENST00000334350 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
MT1F-201ENST00000334350 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
MT1F-201ENST00000334350 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
MT1F-201ENST00000334350 POLA1P09884 1462 aaPredicted RBP21.44■■□□□ 1.02
MT1F-201ENST00000334350 WDR62O43379 1518 aa21.43■■□□□ 1.02
MT1F-201ENST00000334350 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
MT1F-201ENST00000334350 RUSC2Q8N2Y8 1516 aa21.41■■□□□ 1.02
MT1F-201ENST00000334350 ABCA10Q8WWZ4 1543 aa21.39■■□□□ 1.01
MT1F-201ENST00000334350 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
MT1F-201ENST00000334350 IGF1RP08069 1367 aa21.33■■□□□ 1
MT1F-201ENST00000334350 IFT140Q96RY7 1462 aa21.29■■□□□ 1
MT1F-201ENST00000334350 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
MT1F-201ENST00000334350 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
MT1F-201ENST00000334350 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
MT1F-201ENST00000334350 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
MT1F-201ENST00000334350 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
MT1F-201ENST00000334350 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
MT1F-201ENST00000334350 GAPVD1Q14C86 1478 aa21.18■□□□□ 0.98
MT1F-201ENST00000334350 KIF21BO75037 1637 aa21.18■□□□□ 0.98
MT1F-201ENST00000334350 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
MT1F-201ENST00000334350 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
MT1F-201ENST00000334350 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
MT1F-201ENST00000334350 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
MT1F-201ENST00000334350 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
MT1F-201ENST00000334350 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.97
MT1F-201ENST00000334350 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
MT1F-201ENST00000334350 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
MT1F-201ENST00000334350 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
MT1F-201ENST00000334350 CUL7Q14999 1698 aa21.01■□□□□ 0.95
MT1F-201ENST00000334350 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
MT1F-201ENST00000334350 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
MT1F-201ENST00000334350 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
MT1F-201ENST00000334350 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
MT1F-201ENST00000334350 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
MT1F-201ENST00000334350 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
MT1F-201ENST00000334350 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
MT1F-201ENST00000334350 CLIP1P30622 1438 aa20.85■□□□□ 0.93
MT1F-201ENST00000334350 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
MT1F-201ENST00000334350 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
MT1F-201ENST00000334350 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
MT1F-201ENST00000334350 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms