RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
TUBB2A-201ENST00000333628 CCDC180Q9P1Z9 1646 aa28.39■■■□□ 2.14
TUBB2A-201ENST00000333628 ABCC9O60706 1549 aa27.86■■■□□ 2.05
TUBB2A-201ENST00000333628 RB1CC1Q8TDY2 1594 aa26.73■■□□□ 1.87
TUBB2A-201ENST00000333628 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
TUBB2A-201ENST00000333628 NACADO15069 1562 aa26.67■■□□□ 1.86
TUBB2A-201ENST00000333628 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
TUBB2A-201ENST00000333628 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
TUBB2A-201ENST00000333628 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
TUBB2A-201ENST00000333628 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
TUBB2A-201ENST00000333628 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
TUBB2A-201ENST00000333628 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
TUBB2A-201ENST00000333628 SCRIBQ14160 1630 aa25.95■■□□□ 1.75
TUBB2A-201ENST00000333628 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
TUBB2A-201ENST00000333628 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
TUBB2A-201ENST00000333628 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
TUBB2A-201ENST00000333628 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
TUBB2A-201ENST00000333628 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
TUBB2A-201ENST00000333628 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
TUBB2A-201ENST00000333628 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
TUBB2A-201ENST00000333628 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
TUBB2A-201ENST00000333628 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TUBB2A-201ENST00000333628 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
TUBB2A-201ENST00000333628 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
TUBB2A-201ENST00000333628 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
TUBB2A-201ENST00000333628 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
TUBB2A-201ENST00000333628 BAZ1BQ9UIG0 1483 aaKnown RBP24.44■■□□□ 1.5
TUBB2A-201ENST00000333628 WIZO95785 1651 aa24.4■■□□□ 1.5
TUBB2A-201ENST00000333628 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
TUBB2A-201ENST00000333628 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
TUBB2A-201ENST00000333628 NESP48681 1621 aa24.11■■□□□ 1.45
TUBB2A-201ENST00000333628 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
TUBB2A-201ENST00000333628 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
TUBB2A-201ENST00000333628 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
TUBB2A-201ENST00000333628 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
TUBB2A-201ENST00000333628 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.42
TUBB2A-201ENST00000333628 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
TUBB2A-201ENST00000333628 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
TUBB2A-201ENST00000333628 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
TUBB2A-201ENST00000333628 CFTRP13569 1480 aa23.76■■□□□ 1.39
TUBB2A-201ENST00000333628 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
TUBB2A-201ENST00000333628 CUX2O14529 1486 aa23.69■■□□□ 1.38
TUBB2A-201ENST00000333628 PRDM2Q13029 1718 aa23.65■■□□□ 1.38
TUBB2A-201ENST00000333628 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
TUBB2A-201ENST00000333628 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
TUBB2A-201ENST00000333628 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
TUBB2A-201ENST00000333628 WDR62O43379 1518 aa23.51■■□□□ 1.35
TUBB2A-201ENST00000333628 URB2Q14146 1524 aaKnown RBP23.43■■□□□ 1.34
TUBB2A-201ENST00000333628 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
TUBB2A-201ENST00000333628 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
TUBB2A-201ENST00000333628 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
TUBB2A-201ENST00000333628 CUX1P39880 1505 aa23.1■■□□□ 1.29
TUBB2A-201ENST00000333628 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
TUBB2A-201ENST00000333628 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.28
TUBB2A-201ENST00000333628 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
TUBB2A-201ENST00000333628 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
TUBB2A-201ENST00000333628 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
TUBB2A-201ENST00000333628 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
TUBB2A-201ENST00000333628 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
TUBB2A-201ENST00000333628 SOGA1O94964 1423 aa22.97■■□□□ 1.27
TUBB2A-201ENST00000333628 TRIM41Q8WV44 630 aa22.95■■□□□ 1.26
TUBB2A-201ENST00000333628 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.263e-15■■■■■ 59.5
TUBB2A-201ENST00000333628 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
TUBB2A-201ENST00000333628 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
TUBB2A-201ENST00000333628 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.26
TUBB2A-201ENST00000333628 TOP2BQ02880 1626 aa22.89■■□□□ 1.25
TUBB2A-201ENST00000333628 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
TUBB2A-201ENST00000333628 TDRD9Q8NDG6 1382 aaKnown RBP22.86■■□□□ 1.25
TUBB2A-201ENST00000333628 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
TUBB2A-201ENST00000333628 CHD1O14646 1710 aa22.73■■□□□ 1.23
TUBB2A-201ENST00000333628 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
TUBB2A-201ENST00000333628 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
TUBB2A-201ENST00000333628 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
TUBB2A-201ENST00000333628 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
TUBB2A-201ENST00000333628 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
TUBB2A-201ENST00000333628 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
TUBB2A-201ENST00000333628 FBLN2P98095 1184 aa22.64■■□□□ 1.22
TUBB2A-201ENST00000333628 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
TUBB2A-201ENST00000333628 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
TUBB2A-201ENST00000333628 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
TUBB2A-201ENST00000333628 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TUBB2A-201ENST00000333628 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
TUBB2A-201ENST00000333628 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
TUBB2A-201ENST00000333628 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
TUBB2A-201ENST00000333628 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
TUBB2A-201ENST00000333628 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
TUBB2A-201ENST00000333628 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
TUBB2A-201ENST00000333628 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
TUBB2A-201ENST00000333628 KIF27Q86VH2 1401 aa22.41■■□□□ 1.18
TUBB2A-201ENST00000333628 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
TUBB2A-201ENST00000333628 ARHGEF11O15085 1522 aa22.39■■□□□ 1.17
TUBB2A-201ENST00000333628 IGF1RP08069 1367 aa22.35■■□□□ 1.17
TUBB2A-201ENST00000333628 CEP170Q5SW79 1584 aa22.34■■□□□ 1.17
TUBB2A-201ENST00000333628 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
TUBB2A-201ENST00000333628 NUP160Q12769 1436 aa22.3■■□□□ 1.16
TUBB2A-201ENST00000333628 CUL7Q14999 1698 aa22.29■■□□□ 1.16
TUBB2A-201ENST00000333628 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
TUBB2A-201ENST00000333628 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
TUBB2A-201ENST00000333628 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
TUBB2A-201ENST00000333628 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms