RNA–Protein interactions for RNA: ENST00000328381.9

RNF135-202, Transcript of ring finger protein 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF135, Length 2,892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-202ENST00000328381 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
RNF135-202ENST00000328381 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
RNF135-202ENST00000328381 DCAF8L2P0C7V8 631 aa26.38■■□□□ 1.81
RNF135-202ENST00000328381 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
RNF135-202ENST00000328381 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
RNF135-202ENST00000328381 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
RNF135-202ENST00000328381 ABCC9O60706 1549 aa25.88■■□□□ 1.73
RNF135-202ENST00000328381 HRCP23327 699 aa25.75■■□□□ 1.71
RNF135-202ENST00000328381 PCGF6Q9BYE7 350 aa25.52■■□□□ 1.68
RNF135-202ENST00000328381 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
RNF135-202ENST00000328381 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
RNF135-202ENST00000328381 MYO15BQ96JP2 1530 aa25.43■■□□□ 1.66
RNF135-202ENST00000328381 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
RNF135-202ENST00000328381 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
RNF135-202ENST00000328381 NACADO15069 1562 aa25.07■■□□□ 1.6
RNF135-202ENST00000328381 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
RNF135-202ENST00000328381 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
RNF135-202ENST00000328381 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
RNF135-202ENST00000328381 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.53
RNF135-202ENST00000328381 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
RNF135-202ENST00000328381 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
RNF135-202ENST00000328381 SCAF1Q9H7N4 1312 aaKnown RBP24.32■■□□□ 1.48
RNF135-202ENST00000328381 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
RNF135-202ENST00000328381 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
RNF135-202ENST00000328381 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
RNF135-202ENST00000328381 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
RNF135-202ENST00000328381 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
RNF135-202ENST00000328381 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
RNF135-202ENST00000328381 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
RNF135-202ENST00000328381 WIZO95785 1651 aa24.04■■□□□ 1.44
RNF135-202ENST00000328381 BAZ1AQ9NRL2 1556 aaPredicted RBP23.97■■□□□ 1.43
RNF135-202ENST00000328381 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
RNF135-202ENST00000328381 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
RNF135-202ENST00000328381 NEUROD1Q13562 356 aa23.77■■□□□ 1.4
RNF135-202ENST00000328381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
RNF135-202ENST00000328381 ACIN1Q9UKV3 1341 aaKnown RBP23.73■■□□□ 1.39
RNF135-202ENST00000328381 CCER1Q8TC90 406 aaPredicted RBP23.62■■□□□ 1.37
RNF135-202ENST00000328381 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
RNF135-202ENST00000328381 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
RNF135-202ENST00000328381 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
RNF135-202ENST00000328381 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
RNF135-202ENST00000328381 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
RNF135-202ENST00000328381 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
RNF135-202ENST00000328381 TTBK1Q5TCY1 1321 aaPredicted RBP23.48■■□□□ 1.35
RNF135-202ENST00000328381 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
RNF135-202ENST00000328381 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
RNF135-202ENST00000328381 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
RNF135-202ENST00000328381 CENPBP07199 599 aaPredicted RBP23.41■■□□□ 1.34
RNF135-202ENST00000328381 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
RNF135-202ENST00000328381 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
RNF135-202ENST00000328381 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
RNF135-202ENST00000328381 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
RNF135-202ENST00000328381 MYT1Q01538 1121 aa23.17■■□□□ 1.3
RNF135-202ENST00000328381 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
RNF135-202ENST00000328381 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
RNF135-202ENST00000328381 ZNF316A6NFI3 1004 aaPredicted RBP23.05■■□□□ 1.28
RNF135-202ENST00000328381 MIER1Q8N108 512 aa22.98■■□□□ 1.27
RNF135-202ENST00000328381 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
RNF135-202ENST00000328381 CEP162Q5TB80 1403 aa22.83■■□□□ 1.25
RNF135-202ENST00000328381 HNRNPUL2Q1KMD3 747 aaKnown RBP22.82■■□□□ 1.24
RNF135-202ENST00000328381 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
RNF135-202ENST00000328381 SOGA1O94964 1423 aa22.8■■□□□ 1.24
RNF135-202ENST00000328381 SYNJ1O43426 1573 aa22.79■■□□□ 1.24
RNF135-202ENST00000328381 CFTRP13569 1480 aa22.78■■□□□ 1.24
RNF135-202ENST00000328381 RUSC2Q8N2Y8 1516 aa22.76■■□□□ 1.23
RNF135-202ENST00000328381 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
RNF135-202ENST00000328381 NESP48681 1621 aa22.76■■□□□ 1.23
RNF135-202ENST00000328381 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
RNF135-202ENST00000328381 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
RNF135-202ENST00000328381 CUX1P39880 1505 aa22.59■■□□□ 1.21
RNF135-202ENST00000328381 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
RNF135-202ENST00000328381 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
RNF135-202ENST00000328381 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.19
RNF135-202ENST00000328381 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
RNF135-202ENST00000328381 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
RNF135-202ENST00000328381 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
RNF135-202ENST00000328381 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
RNF135-202ENST00000328381 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
RNF135-202ENST00000328381 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
RNF135-202ENST00000328381 EEA1Q15075 1411 aa22.35■■□□□ 1.17
RNF135-202ENST00000328381 APLP2Q06481 763 aa22.35■■□□□ 1.17
RNF135-202ENST00000328381 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
RNF135-202ENST00000328381 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
RNF135-202ENST00000328381 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
RNF135-202ENST00000328381 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
RNF135-202ENST00000328381 KIF21AQ7Z4S6 1674 aa22.28■■□□□ 1.16
RNF135-202ENST00000328381 CUX2O14529 1486 aa22.28■■□□□ 1.16
RNF135-202ENST00000328381 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
RNF135-202ENST00000328381 URB2Q14146 1524 aaKnown RBP22.27■■□□□ 1.16
RNF135-202ENST00000328381 CLIP1P30622 1438 aa22.26■■□□□ 1.15
RNF135-202ENST00000328381 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
RNF135-202ENST00000328381 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
RNF135-202ENST00000328381 DNMBPQ6XZF7 1577 aa22.21■■□□□ 1.15
RNF135-202ENST00000328381 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
RNF135-202ENST00000328381 BCANQ96GW7 911 aa22.21■■□□□ 1.15
RNF135-202ENST00000328381 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
RNF135-202ENST00000328381 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
RNF135-202ENST00000328381 VPS8Q8N3P4 1428 aa22.16■■□□□ 1.14
RNF135-202ENST00000328381 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.14
RNF135-202ENST00000328381 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms