RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
ERGIC1-201ENST00000326654 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
ERGIC1-201ENST00000326654 AEBP2Q6ZN18 517 aaPredicted RBP14.92□□□□□ -0.02
ERGIC1-201ENST00000326654 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
ERGIC1-201ENST00000326654 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
ERGIC1-201ENST00000326654 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
ERGIC1-201ENST00000326654 ABCC9O60706 1549 aa14.61□□□□□ -0.07
ERGIC1-201ENST00000326654 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
ERGIC1-201ENST00000326654 SUPT5HO00267 1087 aaKnown RBP14.34□□□□□ -0.11
ERGIC1-201ENST00000326654 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
ERGIC1-201ENST00000326654 NACADO15069 1562 aa14.03□□□□□ -0.16
ERGIC1-201ENST00000326654 RB1CC1Q8TDY2 1594 aa14□□□□□ -0.17
ERGIC1-201ENST00000326654 SCRIBQ14160 1630 aa14□□□□□ -0.17
ERGIC1-201ENST00000326654 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
ERGIC1-201ENST00000326654 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
ERGIC1-201ENST00000326654 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
ERGIC1-201ENST00000326654 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
ERGIC1-201ENST00000326654 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
ERGIC1-201ENST00000326654 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
ERGIC1-201ENST00000326654 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
ERGIC1-201ENST00000326654 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
ERGIC1-201ENST00000326654 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
ERGIC1-201ENST00000326654 HRCP23327 699 aa13.28□□□□□ -0.28
ERGIC1-201ENST00000326654 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
ERGIC1-201ENST00000326654 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
ERGIC1-201ENST00000326654 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
ERGIC1-201ENST00000326654 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
ERGIC1-201ENST00000326654 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
ERGIC1-201ENST00000326654 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
ERGIC1-201ENST00000326654 WIZO95785 1651 aa13.21□□□□□ -0.29
ERGIC1-201ENST00000326654 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
ERGIC1-201ENST00000326654 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
ERGIC1-201ENST00000326654 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-201ENST00000326654 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
ERGIC1-201ENST00000326654 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
ERGIC1-201ENST00000326654 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
ERGIC1-201ENST00000326654 CCDC88BA6NC98 1476 aa13.07□□□□□ -0.32
ERGIC1-201ENST00000326654 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
ERGIC1-201ENST00000326654 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-201ENST00000326654 NCAPD3P42695 1498 aa12.98□□□□□ -0.33
ERGIC1-201ENST00000326654 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
ERGIC1-201ENST00000326654 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
ERGIC1-201ENST00000326654 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
ERGIC1-201ENST00000326654 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
ERGIC1-201ENST00000326654 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
ERGIC1-201ENST00000326654 CADPSQ9ULU8 1353 aa12.84□□□□□ -0.35
ERGIC1-201ENST00000326654 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
ERGIC1-201ENST00000326654 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
ERGIC1-201ENST00000326654 APLP2Q06481 763 aa12.79□□□□□ -0.36
ERGIC1-201ENST00000326654 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
ERGIC1-201ENST00000326654 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
ERGIC1-201ENST00000326654 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-201ENST00000326654 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
ERGIC1-201ENST00000326654 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
ERGIC1-201ENST00000326654 CFTRP13569 1480 aa12.7□□□□□ -0.38
ERGIC1-201ENST00000326654 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
ERGIC1-201ENST00000326654 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
ERGIC1-201ENST00000326654 ATP1B4Q9UN42 357 aaPredicted RBP12.67□□□□□ -0.38
ERGIC1-201ENST00000326654 EEA1Q15075 1411 aa12.67□□□□□ -0.38
ERGIC1-201ENST00000326654 SOGA1O94964 1423 aa12.66□□□□□ -0.38
ERGIC1-201ENST00000326654 MYT1Q01538 1121 aa12.66□□□□□ -0.38
ERGIC1-201ENST00000326654 NESP48681 1621 aa12.65□□□□□ -0.38
ERGIC1-201ENST00000326654 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
ERGIC1-201ENST00000326654 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
ERGIC1-201ENST00000326654 FBLN2P98095 1184 aa12.62□□□□□ -0.39
ERGIC1-201ENST00000326654 CUX2O14529 1486 aa12.58□□□□□ -0.4
ERGIC1-201ENST00000326654 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
ERGIC1-201ENST00000326654 SYNJ1O43426 1573 aa12.53□□□□□ -0.4
ERGIC1-201ENST00000326654 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
ERGIC1-201ENST00000326654 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
ERGIC1-201ENST00000326654 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
ERGIC1-201ENST00000326654 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
ERGIC1-201ENST00000326654 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
ERGIC1-201ENST00000326654 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
ERGIC1-201ENST00000326654 CUX1P39880 1505 aa12.48□□□□□ -0.41
ERGIC1-201ENST00000326654 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
ERGIC1-201ENST00000326654 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
ERGIC1-201ENST00000326654 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
ERGIC1-201ENST00000326654 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
ERGIC1-201ENST00000326654 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
ERGIC1-201ENST00000326654 SENP3Q9H4L4 574 aaPredicted RBP12.45□□□□□ -0.42
ERGIC1-201ENST00000326654 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
ERGIC1-201ENST00000326654 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
ERGIC1-201ENST00000326654 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
ERGIC1-201ENST00000326654 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
ERGIC1-201ENST00000326654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
ERGIC1-201ENST00000326654 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
ERGIC1-201ENST00000326654 CLIP1P30622 1438 aa12.43□□□□□ -0.42
ERGIC1-201ENST00000326654 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
ERGIC1-201ENST00000326654 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.43
ERGIC1-201ENST00000326654 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
ERGIC1-201ENST00000326654 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
ERGIC1-201ENST00000326654 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
ERGIC1-201ENST00000326654 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
ERGIC1-201ENST00000326654 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
ERGIC1-201ENST00000326654 IGF1RP08069 1367 aa12.37□□□□□ -0.43
ERGIC1-201ENST00000326654 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
ERGIC1-201ENST00000326654 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
ERGIC1-201ENST00000326654 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-201ENST00000326654 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms