RNA–Protein interactions for RNA: ENST00000325509.4

MSC-201, Transcript of musculin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSC, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-201ENST00000325509 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
MSC-201ENST00000325509 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
MSC-201ENST00000325509 ABCC9O60706 1549 aa37.5■■■■□ 3.59
MSC-201ENST00000325509 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
MSC-201ENST00000325509 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.37
MSC-201ENST00000325509 NACADO15069 1562 aa35.96■■■■□ 3.35
MSC-201ENST00000325509 RB1CC1Q8TDY2 1594 aa35.96■■■■□ 3.35
MSC-201ENST00000325509 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
MSC-201ENST00000325509 DCAF1Q9Y4B6 1507 aa35.71■■■■□ 3.31
MSC-201ENST00000325509 PABPN1Q86U42 306 aaKnown RBP eCLIP35.19■■■■□ 3.22
MSC-201ENST00000325509 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
MSC-201ENST00000325509 SCRIBQ14160 1630 aa35.07■■■■□ 3.2
MSC-201ENST00000325509 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
MSC-201ENST00000325509 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.12
MSC-201ENST00000325509 DNAJC5BQ9UF47 199 aa34.41■■■■□ 3.1
MSC-201ENST00000325509 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
MSC-201ENST00000325509 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
MSC-201ENST00000325509 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
MSC-201ENST00000325509 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
MSC-201ENST00000325509 BAZ1AQ9NRL2 1556 aaPredicted RBP33.47■■■□□ 2.95
MSC-201ENST00000325509 MROH2BQ7Z745 1585 aa33.42■■■□□ 2.94
MSC-201ENST00000325509 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
MSC-201ENST00000325509 NCAPD3P42695 1498 aa33.27■■■□□ 2.92
MSC-201ENST00000325509 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
MSC-201ENST00000325509 PEG3Q9GZU2 1588 aa33.13■■■□□ 2.89
MSC-201ENST00000325509 RSF1Q96T23 1441 aaPredicted RBP33.12■■■□□ 2.89
MSC-201ENST00000325509 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
MSC-201ENST00000325509 HMGXB3Q12766 1538 aa33.03■■■□□ 2.88
MSC-201ENST00000325509 WIZO95785 1651 aa33.03■■■□□ 2.88
MSC-201ENST00000325509 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
MSC-201ENST00000325509 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
MSC-201ENST00000325509 NESP48681 1621 aa32.52■■■□□ 2.8
MSC-201ENST00000325509 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
MSC-201ENST00000325509 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
MSC-201ENST00000325509 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
MSC-201ENST00000325509 ERCC6Q03468 1493 aa32.24■■■□□ 2.75
MSC-201ENST00000325509 CFTRP13569 1480 aa32.17■■■□□ 2.74
MSC-201ENST00000325509 PDS5BQ9NTI5 1447 aa32.13■■■□□ 2.73
MSC-201ENST00000325509 KIF21AQ7Z4S6 1674 aa31.98■■■□□ 2.71
MSC-201ENST00000325509 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
MSC-201ENST00000325509 CEP164Q9UPV0 1460 aa31.87■■■□□ 2.69
MSC-201ENST00000325509 THOC2Q8NI27 1593 aaKnown RBP31.83■■■□□ 2.69
MSC-201ENST00000325509 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
MSC-201ENST00000325509 CUX2O14529 1486 aa31.74■■■□□ 2.67
MSC-201ENST00000325509 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
MSC-201ENST00000325509 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
MSC-201ENST00000325509 WDR62O43379 1518 aa31.64■■■□□ 2.66
MSC-201ENST00000325509 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
MSC-201ENST00000325509 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
MSC-201ENST00000325509 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
MSC-201ENST00000325509 CUX1P39880 1505 aa31.32■■■□□ 2.6
MSC-201ENST00000325509 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
MSC-201ENST00000325509 WRNQ14191 1432 aaPredicted RBP eCLIP31.19■■■□□ 2.58
MSC-201ENST00000325509 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
MSC-201ENST00000325509 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
MSC-201ENST00000325509 RAD54L2Q9Y4B4 1467 aa31.16■■■□□ 2.58
MSC-201ENST00000325509 ZNF608Q9ULD9 1512 aaPredicted RBP31.15■■■□□ 2.58
MSC-201ENST00000325509 SOGA1O94964 1423 aa31.13■■■□□ 2.57
MSC-201ENST00000325509 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
MSC-201ENST00000325509 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
MSC-201ENST00000325509 TOP2BQ02880 1626 aa31.01■■■□□ 2.56
MSC-201ENST00000325509 AQRO60306 1485 aaKnown RBP eCLIP31.01■■■□□ 2.56
MSC-201ENST00000325509 TDRD9Q8NDG6 1382 aaKnown RBP31■■■□□ 2.55
MSC-201ENST00000325509 BIVM-ERCC5R4GMW8 1640 aa30.96■■■□□ 2.55
MSC-201ENST00000325509 EIF4G3O43432 1585 aaKnown RBP30.9■■■□□ 2.54
MSC-201ENST00000325509 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
MSC-201ENST00000325509 WDR97A6NE52 1622 aa30.77■■■□□ 2.52
MSC-201ENST00000325509 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
MSC-201ENST00000325509 DNAJC5Q9H3Z4 198 aa30.72■■■□□ 2.51
MSC-201ENST00000325509 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
MSC-201ENST00000325509 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
MSC-201ENST00000325509 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
MSC-201ENST00000325509 FBLN2P98095 1184 aa30.66■■■□□ 2.5
MSC-201ENST00000325509 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
MSC-201ENST00000325509 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
MSC-201ENST00000325509 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
MSC-201ENST00000325509 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
MSC-201ENST00000325509 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
MSC-201ENST00000325509 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
MSC-201ENST00000325509 CHIC1Q5VXU3 224 aa30.46■■■□□ 2.47
MSC-201ENST00000325509 SYNJ2O15056 1496 aa30.45■■■□□ 2.47
MSC-201ENST00000325509 IGF1RP08069 1367 aa30.44■■■□□ 2.46
MSC-201ENST00000325509 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
MSC-201ENST00000325509 CHD1O14646 1710 aa30.43■■■□□ 2.46
MSC-201ENST00000325509 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
MSC-201ENST00000325509 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
MSC-201ENST00000325509 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
MSC-201ENST00000325509 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
MSC-201ENST00000325509 CARMIL1Q5VZK9 1371 aa30.24■■■□□ 2.43
MSC-201ENST00000325509 NUP160Q12769 1436 aa30.16■■■□□ 2.42
MSC-201ENST00000325509 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
MSC-201ENST00000325509 CEP170Q5SW79 1584 aa30.14■■■□□ 2.42
MSC-201ENST00000325509 FAM9AQ8IZU1 332 aaPredicted RBP30.14■■■□□ 2.42
MSC-201ENST00000325509 CUL7Q14999 1698 aa30.13■■■□□ 2.41
MSC-201ENST00000325509 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
MSC-201ENST00000325509 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
MSC-201ENST00000325509 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
MSC-201ENST00000325509 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
MSC-201ENST00000325509 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
MSC-201ENST00000325509 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms