RNA–Protein interactions for RNA: ENST00000324076.4

IRF9-201, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-201ENST00000324076 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
IRF9-201ENST00000324076 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
IRF9-201ENST00000324076 ABCC9O60706 1549 aa26.14■■□□□ 1.78
IRF9-201ENST00000324076 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
IRF9-201ENST00000324076 NACADO15069 1562 aa24.74■■□□□ 1.55
IRF9-201ENST00000324076 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
IRF9-201ENST00000324076 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
IRF9-201ENST00000324076 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
IRF9-201ENST00000324076 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
IRF9-201ENST00000324076 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
IRF9-201ENST00000324076 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
IRF9-201ENST00000324076 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.46
IRF9-201ENST00000324076 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
IRF9-201ENST00000324076 SCRIBQ14160 1630 aa24■■□□□ 1.43
IRF9-201ENST00000324076 SHROOM4Q9ULL8 1493 aa23.76■■□□□ 1.39
IRF9-201ENST00000324076 CC2D2AQ9P2K1 1620 aa23.65■■□□□ 1.38
IRF9-201ENST00000324076 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
IRF9-201ENST00000324076 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
IRF9-201ENST00000324076 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
IRF9-201ENST00000324076 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
IRF9-201ENST00000324076 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
IRF9-201ENST00000324076 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
IRF9-201ENST00000324076 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
IRF9-201ENST00000324076 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
IRF9-201ENST00000324076 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
IRF9-201ENST00000324076 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
IRF9-201ENST00000324076 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
IRF9-201ENST00000324076 ERCC6Q03468 1493 aa22.55■■□□□ 1.2
IRF9-201ENST00000324076 NESP48681 1621 aa22.5■■□□□ 1.19
IRF9-201ENST00000324076 CUX2O14529 1486 aa22.41■■□□□ 1.18
IRF9-201ENST00000324076 WIZO95785 1651 aa22.4■■□□□ 1.18
IRF9-201ENST00000324076 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.17
IRF9-201ENST00000324076 KIF21AQ7Z4S6 1674 aa22.33■■□□□ 1.16
IRF9-201ENST00000324076 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
IRF9-201ENST00000324076 DNAJC5Q9H3Z4 198 aa22.23■■□□□ 1.15
IRF9-201ENST00000324076 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
IRF9-201ENST00000324076 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
IRF9-201ENST00000324076 RSF1Q96T23 1441 aaPredicted RBP22.1■■□□□ 1.13
IRF9-201ENST00000324076 TOP2AP11388 1531 aaKnown RBP22.04■■□□□ 1.12
IRF9-201ENST00000324076 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
IRF9-201ENST00000324076 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
IRF9-201ENST00000324076 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
IRF9-201ENST00000324076 WDR62O43379 1518 aa21.92■■□□□ 1.1
IRF9-201ENST00000324076 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
IRF9-201ENST00000324076 CFTRP13569 1480 aa21.89■■□□□ 1.09
IRF9-201ENST00000324076 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
IRF9-201ENST00000324076 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
IRF9-201ENST00000324076 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
IRF9-201ENST00000324076 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
IRF9-201ENST00000324076 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
IRF9-201ENST00000324076 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
IRF9-201ENST00000324076 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
IRF9-201ENST00000324076 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
IRF9-201ENST00000324076 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
IRF9-201ENST00000324076 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
IRF9-201ENST00000324076 OSCARQ8IYS5 282 aa21.39■■□□□ 1.01
IRF9-201ENST00000324076 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
IRF9-201ENST00000324076 CHD1O14646 1710 aa21.31■■□□□ 1
IRF9-201ENST00000324076 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
IRF9-201ENST00000324076 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 13e-7■■■■■ 33.8
IRF9-201ENST00000324076 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
IRF9-201ENST00000324076 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
IRF9-201ENST00000324076 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
IRF9-201ENST00000324076 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
IRF9-201ENST00000324076 CUX1P39880 1505 aa21.21■□□□□ 0.99
IRF9-201ENST00000324076 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
IRF9-201ENST00000324076 SOGA1O94964 1423 aa21.2■□□□□ 0.98
IRF9-201ENST00000324076 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
IRF9-201ENST00000324076 FBLN2P98095 1184 aa21.13■□□□□ 0.97
IRF9-201ENST00000324076 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
IRF9-201ENST00000324076 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
IRF9-201ENST00000324076 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
IRF9-201ENST00000324076 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
IRF9-201ENST00000324076 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
IRF9-201ENST00000324076 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
IRF9-201ENST00000324076 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
IRF9-201ENST00000324076 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
IRF9-201ENST00000324076 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
IRF9-201ENST00000324076 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
IRF9-201ENST00000324076 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
IRF9-201ENST00000324076 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
IRF9-201ENST00000324076 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
IRF9-201ENST00000324076 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
IRF9-201ENST00000324076 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
IRF9-201ENST00000324076 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
IRF9-201ENST00000324076 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
IRF9-201ENST00000324076 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
IRF9-201ENST00000324076 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
IRF9-201ENST00000324076 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
IRF9-201ENST00000324076 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
IRF9-201ENST00000324076 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
IRF9-201ENST00000324076 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
IRF9-201ENST00000324076 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
IRF9-201ENST00000324076 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
IRF9-201ENST00000324076 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
IRF9-201ENST00000324076 NUP160Q12769 1436 aa20.61■□□□□ 0.89
IRF9-201ENST00000324076 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
IRF9-201ENST00000324076 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
IRF9-201ENST00000324076 CUL7Q14999 1698 aa20.48■□□□□ 0.87
IRF9-201ENST00000324076 PRG4Q92954 1404 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms