RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
TSFM-201ENST00000323833 CCDC180Q9P1Z9 1646 aa33.39■■■□□ 2.93
TSFM-201ENST00000323833 ABCC9O60706 1549 aa32.61■■■□□ 2.81
TSFM-201ENST00000323833 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
TSFM-201ENST00000323833 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
TSFM-201ENST00000323833 NACADO15069 1562 aa31.33■■■□□ 2.61
TSFM-201ENST00000323833 ZCCHC6Q5VYS8 1495 aaKnown RBP31.27■■■□□ 2.6
TSFM-201ENST00000323833 MYO15BQ96JP2 1530 aa31.1■■■□□ 2.57
TSFM-201ENST00000323833 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
TSFM-201ENST00000323833 UNC13AQ9UPW8 1703 aa30.83■■■□□ 2.53
TSFM-201ENST00000323833 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
TSFM-201ENST00000323833 PABPN1Q86U42 306 aaKnown RBP eCLIP30.47■■■□□ 2.47
TSFM-201ENST00000323833 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
TSFM-201ENST00000323833 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
TSFM-201ENST00000323833 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
TSFM-201ENST00000323833 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
TSFM-201ENST00000323833 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
TSFM-201ENST00000323833 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
TSFM-201ENST00000323833 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
TSFM-201ENST00000323833 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
TSFM-201ENST00000323833 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
TSFM-201ENST00000323833 ATAD2BQ9ULI0 1458 aa28.92■■■□□ 2.22
TSFM-201ENST00000323833 SMARCA2P51531 1590 aa28.89■■■□□ 2.22
TSFM-201ENST00000323833 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
TSFM-201ENST00000323833 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
TSFM-201ENST00000323833 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
TSFM-201ENST00000323833 WIZO95785 1651 aa28.7■■■□□ 2.19
TSFM-201ENST00000323833 BAZ1BQ9UIG0 1483 aaKnown RBP28.7■■■□□ 2.18
TSFM-201ENST00000323833 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
TSFM-201ENST00000323833 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
TSFM-201ENST00000323833 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
TSFM-201ENST00000323833 NESP48681 1621 aa28.25■■■□□ 2.11
TSFM-201ENST00000323833 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
TSFM-201ENST00000323833 ERCC6Q03468 1493 aa28.08■■■□□ 2.09
TSFM-201ENST00000323833 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
TSFM-201ENST00000323833 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
TSFM-201ENST00000323833 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
TSFM-201ENST00000323833 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
TSFM-201ENST00000323833 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
TSFM-201ENST00000323833 CFTRP13569 1480 aa27.89■■■□□ 2.06
TSFM-201ENST00000323833 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
TSFM-201ENST00000323833 PRDM2Q13029 1718 aa27.85■■■□□ 2.05
TSFM-201ENST00000323833 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
TSFM-201ENST00000323833 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
TSFM-201ENST00000323833 CUX2O14529 1486 aa27.73■■■□□ 2.03
TSFM-201ENST00000323833 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
TSFM-201ENST00000323833 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
TSFM-201ENST00000323833 WDR62O43379 1518 aa27.57■■■□□ 2
TSFM-201ENST00000323833 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
TSFM-201ENST00000323833 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
TSFM-201ENST00000323833 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
TSFM-201ENST00000323833 ABCC8Q09428 1581 aa27.28■■□□□ 1.96
TSFM-201ENST00000323833 CUX1P39880 1505 aa27.16■■□□□ 1.94
TSFM-201ENST00000323833 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
TSFM-201ENST00000323833 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
TSFM-201ENST00000323833 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
TSFM-201ENST00000323833 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
TSFM-201ENST00000323833 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
TSFM-201ENST00000323833 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
TSFM-201ENST00000323833 SOGA1O94964 1423 aa26.97■■□□□ 1.91
TSFM-201ENST00000323833 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
TSFM-201ENST00000323833 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
TSFM-201ENST00000323833 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
TSFM-201ENST00000323833 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
TSFM-201ENST00000323833 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
TSFM-201ENST00000323833 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
TSFM-201ENST00000323833 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.891e-6■■■■■ 37.7
TSFM-201ENST00000323833 TDRD9Q8NDG6 1382 aaKnown RBP26.82■■□□□ 1.88
TSFM-201ENST00000323833 DNAJC5Q9H3Z4 198 aa26.81■■□□□ 1.88
TSFM-201ENST00000323833 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
TSFM-201ENST00000323833 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
TSFM-201ENST00000323833 ABCA5Q8WWZ7 1642 aa26.7■■□□□ 1.86
TSFM-201ENST00000323833 CHD1O14646 1710 aa26.68■■□□□ 1.86
TSFM-201ENST00000323833 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
TSFM-201ENST00000323833 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
TSFM-201ENST00000323833 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
TSFM-201ENST00000323833 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
TSFM-201ENST00000323833 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
TSFM-201ENST00000323833 FBLN2P98095 1184 aa26.54■■□□□ 1.84
TSFM-201ENST00000323833 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
TSFM-201ENST00000323833 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
TSFM-201ENST00000323833 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
TSFM-201ENST00000323833 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
TSFM-201ENST00000323833 KIF27Q86VH2 1401 aa26.38■■□□□ 1.81
TSFM-201ENST00000323833 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
TSFM-201ENST00000323833 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
TSFM-201ENST00000323833 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
TSFM-201ENST00000323833 CLASP1Q7Z460 1538 aa26.28■■□□□ 1.8
TSFM-201ENST00000323833 IGF1RP08069 1367 aa26.27■■□□□ 1.8
TSFM-201ENST00000323833 CUL7Q14999 1698 aa26.25■■□□□ 1.79
TSFM-201ENST00000323833 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
TSFM-201ENST00000323833 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
TSFM-201ENST00000323833 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
TSFM-201ENST00000323833 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
TSFM-201ENST00000323833 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
TSFM-201ENST00000323833 ARHGEF11O15085 1522 aa26.2■■□□□ 1.79
TSFM-201ENST00000323833 NUP160Q12769 1436 aa26.17■■□□□ 1.78
TSFM-201ENST00000323833 CARMIL1Q5VZK9 1371 aa26.12■■□□□ 1.77
TSFM-201ENST00000323833 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
TSFM-201ENST00000323833 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms