RNA–Protein interactions for RNA: ENST00000321341.10

ME2-201, Transcript of malic enzyme 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME2, Length 9,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME2-201ENST00000321341 PELP1Q8IZL8 1130 aaKnown RBP25.93■■□□□ 1.74
ME2-201ENST00000321341 MYT1Q01538 1121 aa25.58■■□□□ 1.69
ME2-201ENST00000321341 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
ME2-201ENST00000321341 ERICH6Q7L0X2 663 aa24.36■■□□□ 1.49
ME2-201ENST00000321341 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.46
ME2-201ENST00000321341 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
ME2-201ENST00000321341 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
ME2-201ENST00000321341 CENPBP07199 599 aaPredicted RBP23.9■■□□□ 1.42
ME2-201ENST00000321341 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
ME2-201ENST00000321341 NEFLP07196 543 aa23.31■■□□□ 1.32
ME2-201ENST00000321341 APLP2Q06481 763 aa23.24■■□□□ 1.31
ME2-201ENST00000321341 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
ME2-201ENST00000321341 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
ME2-201ENST00000321341 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
ME2-201ENST00000321341 RTL5Q5HYW3 569 aaPredicted RBP22.73■■□□□ 1.23
ME2-201ENST00000321341 GLIPR1L2Q4G1C9 344 aa22.56■■□□□ 1.2
ME2-201ENST00000321341 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
ME2-201ENST00000321341 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
ME2-201ENST00000321341 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.18
ME2-201ENST00000321341 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
ME2-201ENST00000321341 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.12
ME2-201ENST00000321341 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
ME2-201ENST00000321341 NISCHQ9Y2I1 1504 aa21.84■■□□□ 1.09
ME2-201ENST00000321341 ANP32BQ92688 251 aaKnown RBP21.75■■□□□ 1.07
ME2-201ENST00000321341 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
ME2-201ENST00000321341 EIF5BO60841 1220 aaKnown RBP21.66■■□□□ 1.06
ME2-201ENST00000321341 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
ME2-201ENST00000321341 CDK11AQ9UQ88 783 aaPredicted RBP21.58■■□□□ 1.05
ME2-201ENST00000321341 HRCP23327 699 aa21.56■■□□□ 1.04
ME2-201ENST00000321341 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
ME2-201ENST00000321341 UBTFP17480 764 aaKnown RBP21.5■■□□□ 1.03
ME2-201ENST00000321341 ANP32AP39687 249 aaKnown RBP21.5■■□□□ 1.03
ME2-201ENST00000321341 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
ME2-201ENST00000321341 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
ME2-201ENST00000321341 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
ME2-201ENST00000321341 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
ME2-201ENST00000321341 POLR3GLQ9BT43 218 aa21.27■□□□□ 0.99
ME2-201ENST00000321341 TRIM44Q96DX7 344 aaPredicted RBP21.17■□□□□ 0.98
ME2-201ENST00000321341 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
ME2-201ENST00000321341 NCLP19338 710 aaKnown RBP21.15■□□□□ 0.98
ME2-201ENST00000321341 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
ME2-201ENST00000321341 CDK11BP21127 795 aaKnown RBP21.08■□□□□ 0.97
ME2-201ENST00000321341 NEFMP07197 916 aa21.03■□□□□ 0.96
ME2-201ENST00000321341 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
ME2-201ENST00000321341 HSP90AA1P07900 732 aaKnown RBP20.99■□□□□ 0.95
ME2-201ENST00000321341 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
ME2-201ENST00000321341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
ME2-201ENST00000321341 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
ME2-201ENST00000321341 ANP32CO43423 234 aa20.87■□□□□ 0.93
ME2-201ENST00000321341 CANXP27824 592 aaKnown RBP20.86■□□□□ 0.93
ME2-201ENST00000321341 ITGAEP38570 1179 aa20.77■□□□□ 0.92
ME2-201ENST00000321341 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
ME2-201ENST00000321341 ACIN1Q9UKV3 1341 aaKnown RBP20.76■□□□□ 0.91
ME2-201ENST00000321341 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
ME2-201ENST00000321341 BCANQ96GW7 911 aa20.73■□□□□ 0.91
ME2-201ENST00000321341 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
ME2-201ENST00000321341 SLC24A1O60721 1099 aa20.6■□□□□ 0.89
ME2-201ENST00000321341 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
ME2-201ENST00000321341 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
ME2-201ENST00000321341 PPARGC1BQ86YN6 1023 aaKnown RBP20.57■□□□□ 0.88
ME2-201ENST00000321341 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
ME2-201ENST00000321341 NBR1Q14596 966 aa20.55■□□□□ 0.88
ME2-201ENST00000321341 BECN1Q14457 450 aa20.52■□□□□ 0.88
ME2-201ENST00000321341 GOLGA6L22H0YM25 854 aa20.52■□□□□ 0.87
ME2-201ENST00000321341 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
ME2-201ENST00000321341 NAP1L5Q96NT1 182 aaPredicted RBP20.41■□□□□ 0.86
ME2-201ENST00000321341 PTMSP20962 102 aa20.4■□□□□ 0.86
ME2-201ENST00000321341 GOLGA6L6A8MZA4 724 aa20.39■□□□□ 0.85
ME2-201ENST00000321341 DNTTIP2Q5QJE6 756 aaKnown RBP20.38■□□□□ 0.85
ME2-201ENST00000321341 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.37■□□□□ 0.85
ME2-201ENST00000321341 BCL11AQ9H165 835 aa20.36■□□□□ 0.85
ME2-201ENST00000321341 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
ME2-201ENST00000321341 TRIM52Q96A61 297 aa20.34■□□□□ 0.85
ME2-201ENST00000321341 CALRP27797 417 aaKnown RBP20.33■□□□□ 0.85
ME2-201ENST00000321341 PTMAP06454 111 aaKnown RBP20.33■□□□□ 0.84
ME2-201ENST00000321341 NRDCO43847 1150 aa20.32■□□□□ 0.84
ME2-201ENST00000321341 ZRSR1Q15695 479 aaKnown RBP20.3■□□□□ 0.84
ME2-201ENST00000321341 L1TD1Q5T7N2 865 aaKnown RBP20.26■□□□□ 0.83
ME2-201ENST00000321341 PPM1GO15355 546 aaPredicted RBP20.24■□□□□ 0.83
ME2-201ENST00000321341 FKBP8Q14318 412 aa20.24■□□□□ 0.83
ME2-201ENST00000321341 CCDC136Q96JN2 1154 aa20.23■□□□□ 0.83
ME2-201ENST00000321341 ARXQ96QS3 562 aa20.23■□□□□ 0.83
ME2-201ENST00000321341 TNNT3P45378 269 aaPredicted RBP20.22■□□□□ 0.83
ME2-201ENST00000321341 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
ME2-201ENST00000321341 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
ME2-201ENST00000321341 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
ME2-201ENST00000321341 MSNP26038 577 aaKnown RBP20.11■□□□□ 0.81
ME2-201ENST00000321341 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
ME2-201ENST00000321341 SETQ01105 290 aaPredicted RBP20.05■□□□□ 0.8
ME2-201ENST00000321341 CASC1Q6TDU7 716 aa20.04■□□□□ 0.8
ME2-201ENST00000321341 A0A0U1RQG5 324 aaPredicted RBP19.93■□□□□ 0.78
ME2-201ENST00000321341 GOLGA6L1Q8N7Z2 621 aa19.93■□□□□ 0.78
ME2-201ENST00000321341 HNRNPUQ00839 825 aaKnown RBP eCLIP19.93■□□□□ 0.78
ME2-201ENST00000321341 NOP58Q9Y2X3 529 aaKnown RBP19.9■□□□□ 0.78
ME2-201ENST00000321341 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
ME2-201ENST00000321341 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
ME2-201ENST00000321341 RSPH6AQ9H0K4 717 aa19.87■□□□□ 0.77
ME2-201ENST00000321341 ESF1Q9H501 851 aaKnown RBP19.86■□□□□ 0.77
ME2-201ENST00000321341 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
ME2-201ENST00000321341 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms