RNA–Protein interactions for RNA: ENST00000320996.14

PITPNB-201, Transcript of phosphatidylinositol transfer protein beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PITPNB, Length 2,826 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-201ENST00000320996 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
PITPNB-201ENST00000320996 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
PITPNB-201ENST00000320996 ABCC9O60706 1549 aa25.78■■□□□ 1.72
PITPNB-201ENST00000320996 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
PITPNB-201ENST00000320996 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
PITPNB-201ENST00000320996 DCAF1Q9Y4B6 1507 aa25.09■■□□□ 1.61
PITPNB-201ENST00000320996 NACADO15069 1562 aa24.95■■□□□ 1.59
PITPNB-201ENST00000320996 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
PITPNB-201ENST00000320996 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
PITPNB-201ENST00000320996 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
PITPNB-201ENST00000320996 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
PITPNB-201ENST00000320996 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
PITPNB-201ENST00000320996 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
PITPNB-201ENST00000320996 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
PITPNB-201ENST00000320996 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
PITPNB-201ENST00000320996 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
PITPNB-201ENST00000320996 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
PITPNB-201ENST00000320996 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
PITPNB-201ENST00000320996 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
PITPNB-201ENST00000320996 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
PITPNB-201ENST00000320996 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
PITPNB-201ENST00000320996 WIZO95785 1651 aa23.41■■□□□ 1.34
PITPNB-201ENST00000320996 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
PITPNB-201ENST00000320996 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
PITPNB-201ENST00000320996 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
PITPNB-201ENST00000320996 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
PITPNB-201ENST00000320996 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
PITPNB-201ENST00000320996 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
PITPNB-201ENST00000320996 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
PITPNB-201ENST00000320996 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
PITPNB-201ENST00000320996 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
PITPNB-201ENST00000320996 CCDC88BA6NC98 1476 aa22.89■■□□□ 1.25
PITPNB-201ENST00000320996 NESP48681 1621 aa22.52■■□□□ 1.2
PITPNB-201ENST00000320996 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
PITPNB-201ENST00000320996 CFTRP13569 1480 aa22.48■■□□□ 1.19
PITPNB-201ENST00000320996 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.18
PITPNB-201ENST00000320996 ABCC8Q09428 1581 aa22.36■■□□□ 1.17
PITPNB-201ENST00000320996 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.17
PITPNB-201ENST00000320996 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
PITPNB-201ENST00000320996 PRDM2Q13029 1718 aa22.26■■□□□ 1.15
PITPNB-201ENST00000320996 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
PITPNB-201ENST00000320996 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
PITPNB-201ENST00000320996 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
PITPNB-201ENST00000320996 KIF21AQ7Z4S6 1674 aa22.18■■□□□ 1.14
PITPNB-201ENST00000320996 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
PITPNB-201ENST00000320996 SYNJ1O43426 1573 aa22.13■■□□□ 1.13
PITPNB-201ENST00000320996 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
PITPNB-201ENST00000320996 CUX1P39880 1505 aa22.08■■□□□ 1.13
PITPNB-201ENST00000320996 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
PITPNB-201ENST00000320996 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
PITPNB-201ENST00000320996 TOPBP1Q92547 1522 aa21.97■■□□□ 1.11
PITPNB-201ENST00000320996 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
PITPNB-201ENST00000320996 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
PITPNB-201ENST00000320996 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
PITPNB-201ENST00000320996 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
PITPNB-201ENST00000320996 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
PITPNB-201ENST00000320996 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
PITPNB-201ENST00000320996 POLA1P09884 1462 aaPredicted RBP21.86■■□□□ 1.09
PITPNB-201ENST00000320996 SOGA1O94964 1423 aa21.85■■□□□ 1.09
PITPNB-201ENST00000320996 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
PITPNB-201ENST00000320996 WDR62O43379 1518 aa21.83■■□□□ 1.08
PITPNB-201ENST00000320996 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
PITPNB-201ENST00000320996 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
PITPNB-201ENST00000320996 CUX2O14529 1486 aa21.73■■□□□ 1.07
PITPNB-201ENST00000320996 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
PITPNB-201ENST00000320996 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
PITPNB-201ENST00000320996 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
PITPNB-201ENST00000320996 KIF27Q86VH2 1401 aa21.64■■□□□ 1.05
PITPNB-201ENST00000320996 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
PITPNB-201ENST00000320996 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
PITPNB-201ENST00000320996 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
PITPNB-201ENST00000320996 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
PITPNB-201ENST00000320996 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
PITPNB-201ENST00000320996 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.056e-7■■■□□ 16.7
PITPNB-201ENST00000320996 EEA1Q15075 1411 aa21.55■■□□□ 1.04
PITPNB-201ENST00000320996 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
PITPNB-201ENST00000320996 IGF1RP08069 1367 aa21.51■■□□□ 1.03
PITPNB-201ENST00000320996 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
PITPNB-201ENST00000320996 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
PITPNB-201ENST00000320996 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
PITPNB-201ENST00000320996 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
PITPNB-201ENST00000320996 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
PITPNB-201ENST00000320996 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
PITPNB-201ENST00000320996 PRXQ9BXM0 1461 aa21.38■■□□□ 1.01
PITPNB-201ENST00000320996 UBTFP17480 764 aaKnown RBP21.37■■□□□ 1.01
PITPNB-201ENST00000320996 ERICH3Q5RHP9 1530 aa21.36■■□□□ 1.01
PITPNB-201ENST00000320996 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
PITPNB-201ENST00000320996 KIF21BO75037 1637 aa21.33■■□□□ 1
PITPNB-201ENST00000320996 GOLGA3Q08378 1498 aa21.32■■□□□ 1
PITPNB-201ENST00000320996 FBLN2P98095 1184 aa21.31■■□□□ 1
PITPNB-201ENST00000320996 RANGAP1P46060 587 aaPredicted RBP21.29■■□□□ 1
PITPNB-201ENST00000320996 CUL7Q14999 1698 aa21.29■■□□□ 1
PITPNB-201ENST00000320996 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
PITPNB-201ENST00000320996 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
PITPNB-201ENST00000320996 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
PITPNB-201ENST00000320996 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
PITPNB-201ENST00000320996 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
PITPNB-201ENST00000320996 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
PITPNB-201ENST00000320996 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
PITPNB-201ENST00000320996 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms