RNA–Protein interactions for RNA: ENST00000319104.7

RNF170-203, Transcript of ring finger protein 170, humanhuman

TSL 1 (best) BASIC

Gene RNF170, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-203ENST00000319104 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.19
RNF170-203ENST00000319104 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
RNF170-203ENST00000319104 ABCC9O60706 1549 aa24.41■■□□□ 1.5
RNF170-203ENST00000319104 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
RNF170-203ENST00000319104 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
RNF170-203ENST00000319104 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
RNF170-203ENST00000319104 NACADO15069 1562 aa23.63■■□□□ 1.37
RNF170-203ENST00000319104 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
RNF170-203ENST00000319104 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
RNF170-203ENST00000319104 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
RNF170-203ENST00000319104 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.29
RNF170-203ENST00000319104 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
RNF170-203ENST00000319104 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
RNF170-203ENST00000319104 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
RNF170-203ENST00000319104 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
RNF170-203ENST00000319104 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
RNF170-203ENST00000319104 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
RNF170-203ENST00000319104 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
RNF170-203ENST00000319104 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
RNF170-203ENST00000319104 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
RNF170-203ENST00000319104 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
RNF170-203ENST00000319104 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
RNF170-203ENST00000319104 WIZO95785 1651 aa21.99■■□□□ 1.11
RNF170-203ENST00000319104 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
RNF170-203ENST00000319104 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
RNF170-203ENST00000319104 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
RNF170-203ENST00000319104 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
RNF170-203ENST00000319104 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
RNF170-203ENST00000319104 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
RNF170-203ENST00000319104 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
RNF170-203ENST00000319104 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
RNF170-203ENST00000319104 CCDC88BA6NC98 1476 aa21.49■■□□□ 1.03
RNF170-203ENST00000319104 NESP48681 1621 aa21.29■■□□□ 1
RNF170-203ENST00000319104 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
RNF170-203ENST00000319104 CFTRP13569 1480 aa21.21■□□□□ 0.99
RNF170-203ENST00000319104 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
RNF170-203ENST00000319104 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
RNF170-203ENST00000319104 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
RNF170-203ENST00000319104 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
RNF170-203ENST00000319104 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
RNF170-203ENST00000319104 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
RNF170-203ENST00000319104 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
RNF170-203ENST00000319104 ABCC8Q09428 1581 aa20.91■□□□□ 0.94
RNF170-203ENST00000319104 URB2Q14146 1524 aaKnown RBP20.81■□□□□ 0.92
RNF170-203ENST00000319104 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
RNF170-203ENST00000319104 MRC2Q9UBG0 1479 aa20.8■□□□□ 0.92
RNF170-203ENST00000319104 CUX1P39880 1505 aa20.79■□□□□ 0.92
RNF170-203ENST00000319104 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
RNF170-203ENST00000319104 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
RNF170-203ENST00000319104 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
RNF170-203ENST00000319104 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
RNF170-203ENST00000319104 WDR62O43379 1518 aa20.72■□□□□ 0.91
RNF170-203ENST00000319104 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
RNF170-203ENST00000319104 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
RNF170-203ENST00000319104 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
RNF170-203ENST00000319104 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
RNF170-203ENST00000319104 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
RNF170-203ENST00000319104 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
RNF170-203ENST00000319104 CUX2O14529 1486 aa20.57■□□□□ 0.88
RNF170-203ENST00000319104 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
RNF170-203ENST00000319104 SOGA1O94964 1423 aa20.5■□□□□ 0.87
RNF170-203ENST00000319104 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
RNF170-203ENST00000319104 IFT140Q96RY7 1462 aa20.44■□□□□ 0.86
RNF170-203ENST00000319104 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
RNF170-203ENST00000319104 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
RNF170-203ENST00000319104 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
RNF170-203ENST00000319104 TDRD9Q8NDG6 1382 aaKnown RBP20.39■□□□□ 0.85
RNF170-203ENST00000319104 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
RNF170-203ENST00000319104 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.85
RNF170-203ENST00000319104 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
RNF170-203ENST00000319104 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
RNF170-203ENST00000319104 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
RNF170-203ENST00000319104 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
RNF170-203ENST00000319104 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
RNF170-203ENST00000319104 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
RNF170-203ENST00000319104 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
RNF170-203ENST00000319104 IGF1RP08069 1367 aa20.18■□□□□ 0.82
RNF170-203ENST00000319104 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
RNF170-203ENST00000319104 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.82
RNF170-203ENST00000319104 EEA1Q15075 1411 aa20.14■□□□□ 0.81
RNF170-203ENST00000319104 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
RNF170-203ENST00000319104 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
RNF170-203ENST00000319104 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
RNF170-203ENST00000319104 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
RNF170-203ENST00000319104 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
RNF170-203ENST00000319104 CUL7Q14999 1698 aa20.05■□□□□ 0.8
RNF170-203ENST00000319104 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
RNF170-203ENST00000319104 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
RNF170-203ENST00000319104 FBLN2P98095 1184 aa20.01■□□□□ 0.79
RNF170-203ENST00000319104 SYNJ2O15056 1496 aa20■□□□□ 0.79
RNF170-203ENST00000319104 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
RNF170-203ENST00000319104 CHD1O14646 1710 aa19.98■□□□□ 0.79
RNF170-203ENST00000319104 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
RNF170-203ENST00000319104 KIF21BO75037 1637 aa19.96■□□□□ 0.79
RNF170-203ENST00000319104 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
RNF170-203ENST00000319104 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
RNF170-203ENST00000319104 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
RNF170-203ENST00000319104 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
RNF170-203ENST00000319104 NUP160Q12769 1436 aa19.83■□□□□ 0.77
RNF170-203ENST00000319104 UBTFP17480 764 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms