RNA–Protein interactions for RNA: ENST00000318561.7

SFTPC-201, Transcript of surfactant protein C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFTPC, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-201ENST00000318561 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
SFTPC-201ENST00000318561 ABCC9O60706 1549 aa38.1■■■■□ 3.69
SFTPC-201ENST00000318561 DNAJC5BQ9UF47 199 aa36.84■■■■□ 3.49
SFTPC-201ENST00000318561 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
SFTPC-201ENST00000318561 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
SFTPC-201ENST00000318561 PABPN1Q86U42 306 aaKnown RBP eCLIP35.36■■■■□ 3.25
SFTPC-201ENST00000318561 NACADO15069 1562 aa35.13■■■■□ 3.21
SFTPC-201ENST00000318561 DCAF8L2P0C7V8 631 aa34.89■■■■□ 3.18
SFTPC-201ENST00000318561 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
SFTPC-201ENST00000318561 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.15
SFTPC-201ENST00000318561 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
SFTPC-201ENST00000318561 CECR2Q9BXF3 1484 aa34.41■■■■□ 3.1
SFTPC-201ENST00000318561 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
SFTPC-201ENST00000318561 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
SFTPC-201ENST00000318561 SHROOM4Q9ULL8 1493 aa34.03■■■■□ 3.04
SFTPC-201ENST00000318561 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.03
SFTPC-201ENST00000318561 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
SFTPC-201ENST00000318561 DCAF1Q9Y4B6 1507 aa33.7■■■□□ 2.99
SFTPC-201ENST00000318561 SCRIBQ14160 1630 aa33.58■■■□□ 2.97
SFTPC-201ENST00000318561 CUX2O14529 1486 aa33.22■■■□□ 2.91
SFTPC-201ENST00000318561 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
SFTPC-201ENST00000318561 TRIM41Q8WV44 630 aa32.65■■■□□ 2.82
SFTPC-201ENST00000318561 NCAPD3P42695 1498 aa32.51■■■□□ 2.79
SFTPC-201ENST00000318561 NESP48681 1621 aa32.41■■■□□ 2.78
SFTPC-201ENST00000318561 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
SFTPC-201ENST00000318561 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
SFTPC-201ENST00000318561 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
SFTPC-201ENST00000318561 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
SFTPC-201ENST00000318561 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
SFTPC-201ENST00000318561 SMARCA4P51532 1647 aa31.88■■■□□ 2.69
SFTPC-201ENST00000318561 BAZ1BQ9UIG0 1483 aaKnown RBP31.87■■■□□ 2.69
SFTPC-201ENST00000318561 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.68
SFTPC-201ENST00000318561 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
SFTPC-201ENST00000318561 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
SFTPC-201ENST00000318561 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
SFTPC-201ENST00000318561 OSCARQ8IYS5 282 aa31.58■■■□□ 2.65
SFTPC-201ENST00000318561 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
SFTPC-201ENST00000318561 WDR62O43379 1518 aa31.53■■■□□ 2.64
SFTPC-201ENST00000318561 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
SFTPC-201ENST00000318561 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
SFTPC-201ENST00000318561 CEP164Q9UPV0 1460 aa31.24■■■□□ 2.59
SFTPC-201ENST00000318561 RIMBP3CA6NJZ7 1639 aa31.23■■■□□ 2.59
SFTPC-201ENST00000318561 RIMBP3BA6NNM3 1639 aa31.23■■■□□ 2.59
SFTPC-201ENST00000318561 RIMBP3Q9UFD9 1639 aa31.23■■■□□ 2.59
SFTPC-201ENST00000318561 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
SFTPC-201ENST00000318561 RSF1Q96T23 1441 aaPredicted RBP31.07■■■□□ 2.57
SFTPC-201ENST00000318561 WIZO95785 1651 aa31.07■■■□□ 2.56
SFTPC-201ENST00000318561 ARHGEF11O15085 1522 aa31.05■■■□□ 2.56
SFTPC-201ENST00000318561 TRHP20396 242 aaPredicted RBP30.98■■■□□ 2.55
SFTPC-201ENST00000318561 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
SFTPC-201ENST00000318561 URB2Q14146 1524 aaKnown RBP30.96■■■□□ 2.55
SFTPC-201ENST00000318561 AEBP2Q6ZN18 517 aaPredicted RBP30.89■■■□□ 2.54
SFTPC-201ENST00000318561 CFTRP13569 1480 aa30.88■■■□□ 2.53
SFTPC-201ENST00000318561 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
SFTPC-201ENST00000318561 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
SFTPC-201ENST00000318561 ARAP1Q96P48 1450 aa30.7■■■□□ 2.5
SFTPC-201ENST00000318561 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
SFTPC-201ENST00000318561 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.47
SFTPC-201ENST00000318561 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
SFTPC-201ENST00000318561 FBLN2P98095 1184 aa30.42■■■□□ 2.46
SFTPC-201ENST00000318561 TOPBP1Q92547 1522 aa30.4■■■□□ 2.46
SFTPC-201ENST00000318561 CHD1O14646 1710 aa30.39■■■□□ 2.45
SFTPC-201ENST00000318561 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.45
SFTPC-201ENST00000318561 CCDC88BA6NC98 1476 aa30.37■■■□□ 2.45
SFTPC-201ENST00000318561 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
SFTPC-201ENST00000318561 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
SFTPC-201ENST00000318561 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
SFTPC-201ENST00000318561 DNMBPQ6XZF7 1577 aa30.14■■■□□ 2.42
SFTPC-201ENST00000318561 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
SFTPC-201ENST00000318561 POLA1P09884 1462 aaPredicted RBP30.03■■■□□ 2.4
SFTPC-201ENST00000318561 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
SFTPC-201ENST00000318561 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
SFTPC-201ENST00000318561 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
SFTPC-201ENST00000318561 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
SFTPC-201ENST00000318561 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
SFTPC-201ENST00000318561 GAPVD1Q14C86 1478 aa29.9■■■□□ 2.38
SFTPC-201ENST00000318561 SOGA1O94964 1423 aa29.88■■■□□ 2.37
SFTPC-201ENST00000318561 MAGI1Q96QZ7 1491 aaPredicted RBP29.81■■■□□ 2.36
SFTPC-201ENST00000318561 SYNJ2O15056 1496 aa29.75■■■□□ 2.35
SFTPC-201ENST00000318561 ILDR1Q86SU0 546 aaPredicted RBP29.75■■■□□ 2.35
SFTPC-201ENST00000318561 GRIN2BQ13224 1484 aa29.73■■■□□ 2.35
SFTPC-201ENST00000318561 WDR97A6NE52 1622 aa29.7■■■□□ 2.34
SFTPC-201ENST00000318561 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
SFTPC-201ENST00000318561 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
SFTPC-201ENST00000318561 KDM4FA0A1W2PPD8 638 aa29.48■■■□□ 2.31
SFTPC-201ENST00000318561 CUX1P39880 1505 aa29.48■■■□□ 2.31
SFTPC-201ENST00000318561 KIF13AQ9H1H9 1805 aa29.42■■■□□ 2.3
SFTPC-201ENST00000318561 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
SFTPC-201ENST00000318561 CEP170Q5SW79 1584 aa29.4■■■□□ 2.3
SFTPC-201ENST00000318561 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
SFTPC-201ENST00000318561 FAM69CQ0P6D2 419 aa29.32■■■□□ 2.28
SFTPC-201ENST00000318561 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
SFTPC-201ENST00000318561 NUP160Q12769 1436 aa29.3■■■□□ 2.28
SFTPC-201ENST00000318561 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
SFTPC-201ENST00000318561 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
SFTPC-201ENST00000318561 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
SFTPC-201ENST00000318561 TOP2BQ02880 1626 aa29.24■■■□□ 2.27
SFTPC-201ENST00000318561 ABCC10Q5T3U5 1492 aa29.23■■■□□ 2.27
SFTPC-201ENST00000318561 SHROOM2Q13796 1616 aa29.22■■■□□ 2.27
SFTPC-201ENST00000318561 ADAMTS12P58397 1594 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 329.9 ms