RNA–Protein interactions for RNA: ENST00000318325.6

MRPL43-202, Transcript of mitochondrial ribosomal protein L43, humanhuman

TSL 1 (best) BASIC

Gene MRPL43, Length 2,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-202ENST00000318325 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
MRPL43-202ENST00000318325 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
MRPL43-202ENST00000318325 ABCC9O60706 1549 aa26.27■■□□□ 1.8
MRPL43-202ENST00000318325 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
MRPL43-202ENST00000318325 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
MRPL43-202ENST00000318325 DCAF1Q9Y4B6 1507 aa25.71■■□□□ 1.71
MRPL43-202ENST00000318325 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
MRPL43-202ENST00000318325 NACADO15069 1562 aa25.56■■□□□ 1.68
MRPL43-202ENST00000318325 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
MRPL43-202ENST00000318325 SCRIBQ14160 1630 aa25.04■■□□□ 1.6
MRPL43-202ENST00000318325 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
MRPL43-202ENST00000318325 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
MRPL43-202ENST00000318325 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
MRPL43-202ENST00000318325 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
MRPL43-202ENST00000318325 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
MRPL43-202ENST00000318325 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
MRPL43-202ENST00000318325 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
MRPL43-202ENST00000318325 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
MRPL43-202ENST00000318325 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
MRPL43-202ENST00000318325 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
MRPL43-202ENST00000318325 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
MRPL43-202ENST00000318325 WIZO95785 1651 aa23.77■■□□□ 1.4
MRPL43-202ENST00000318325 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
MRPL43-202ENST00000318325 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
MRPL43-202ENST00000318325 PEG3Q9GZU2 1588 aa23.72■■□□□ 1.39
MRPL43-202ENST00000318325 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
MRPL43-202ENST00000318325 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
MRPL43-202ENST00000318325 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
MRPL43-202ENST00000318325 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
MRPL43-202ENST00000318325 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
MRPL43-202ENST00000318325 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
MRPL43-202ENST00000318325 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
MRPL43-202ENST00000318325 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
MRPL43-202ENST00000318325 CFTRP13569 1480 aa22.96■■□□□ 1.27
MRPL43-202ENST00000318325 NESP48681 1621 aa22.93■■□□□ 1.26
MRPL43-202ENST00000318325 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
MRPL43-202ENST00000318325 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
MRPL43-202ENST00000318325 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
MRPL43-202ENST00000318325 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
MRPL43-202ENST00000318325 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
MRPL43-202ENST00000318325 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
MRPL43-202ENST00000318325 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
MRPL43-202ENST00000318325 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
MRPL43-202ENST00000318325 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
MRPL43-202ENST00000318325 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
MRPL43-202ENST00000318325 CUX1P39880 1505 aa22.48■■□□□ 1.19
MRPL43-202ENST00000318325 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
MRPL43-202ENST00000318325 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
MRPL43-202ENST00000318325 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
MRPL43-202ENST00000318325 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
MRPL43-202ENST00000318325 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
MRPL43-202ENST00000318325 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
MRPL43-202ENST00000318325 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
MRPL43-202ENST00000318325 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
MRPL43-202ENST00000318325 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
MRPL43-202ENST00000318325 WDR62O43379 1518 aa22.34■■□□□ 1.17
MRPL43-202ENST00000318325 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
MRPL43-202ENST00000318325 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
MRPL43-202ENST00000318325 SOGA1O94964 1423 aa22.2■■□□□ 1.15
MRPL43-202ENST00000318325 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
MRPL43-202ENST00000318325 CUX2O14529 1486 aa22.2■■□□□ 1.14
MRPL43-202ENST00000318325 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
MRPL43-202ENST00000318325 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
MRPL43-202ENST00000318325 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
MRPL43-202ENST00000318325 RUSC2Q8N2Y8 1516 aa22.08■■□□□ 1.13
MRPL43-202ENST00000318325 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
MRPL43-202ENST00000318325 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
MRPL43-202ENST00000318325 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
MRPL43-202ENST00000318325 KIF27Q86VH2 1401 aa22.02■■□□□ 1.11
MRPL43-202ENST00000318325 ZNF608Q9ULD9 1512 aaPredicted RBP22.01■■□□□ 1.11
MRPL43-202ENST00000318325 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.115e-8■■■■□ 19.3
MRPL43-202ENST00000318325 EEA1Q15075 1411 aa21.96■■□□□ 1.11
MRPL43-202ENST00000318325 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
MRPL43-202ENST00000318325 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
MRPL43-202ENST00000318325 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
MRPL43-202ENST00000318325 IGF1RP08069 1367 aa21.91■■□□□ 1.1
MRPL43-202ENST00000318325 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
MRPL43-202ENST00000318325 GRIN2BQ13224 1484 aa21.83■■□□□ 1.09
MRPL43-202ENST00000318325 ERICH3Q5RHP9 1530 aa21.82■■□□□ 1.08
MRPL43-202ENST00000318325 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
MRPL43-202ENST00000318325 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
MRPL43-202ENST00000318325 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
MRPL43-202ENST00000318325 EHMT2Q96KQ7 1210 aa21.75■■□□□ 1.07
MRPL43-202ENST00000318325 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
MRPL43-202ENST00000318325 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
MRPL43-202ENST00000318325 CUL7Q14999 1698 aa21.71■■□□□ 1.07
MRPL43-202ENST00000318325 MAGI1Q96QZ7 1491 aaPredicted RBP21.69■■□□□ 1.06
MRPL43-202ENST00000318325 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
MRPL43-202ENST00000318325 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
MRPL43-202ENST00000318325 KIF21BO75037 1637 aa21.68■■□□□ 1.06
MRPL43-202ENST00000318325 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
MRPL43-202ENST00000318325 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
MRPL43-202ENST00000318325 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
MRPL43-202ENST00000318325 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
MRPL43-202ENST00000318325 FBLN2P98095 1184 aa21.61■■□□□ 1.05
MRPL43-202ENST00000318325 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
MRPL43-202ENST00000318325 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
MRPL43-202ENST00000318325 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
MRPL43-202ENST00000318325 CHD1O14646 1710 aa21.48■■□□□ 1.03
MRPL43-202ENST00000318325 NUP160Q12769 1436 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms