RNA–Protein interactions for RNA: ENST00000318304.12

PPFIBP1-202, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-202ENST00000318304 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
PPFIBP1-202ENST00000318304 HRCP23327 699 aa12.86□□□□□ -0.35
PPFIBP1-202ENST00000318304 SHROOM4Q9ULL8 1493 aa12.77□□□□□ -0.37
PPFIBP1-202ENST00000318304 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
PPFIBP1-202ENST00000318304 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
PPFIBP1-202ENST00000318304 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
PPFIBP1-202ENST00000318304 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
PPFIBP1-202ENST00000318304 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
PPFIBP1-202ENST00000318304 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
PPFIBP1-202ENST00000318304 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.44
PPFIBP1-202ENST00000318304 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
PPFIBP1-202ENST00000318304 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
PPFIBP1-202ENST00000318304 TRIM26Q12899 539 aaPredicted RBP12.17□□□□□ -0.46
PPFIBP1-202ENST00000318304 ZCCHC6Q5VYS8 1495 aaKnown RBP12.12□□□□□ -0.47
PPFIBP1-202ENST00000318304 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
PPFIBP1-202ENST00000318304 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
PPFIBP1-202ENST00000318304 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
PPFIBP1-202ENST00000318304 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
PPFIBP1-202ENST00000318304 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
PPFIBP1-202ENST00000318304 FAM9AQ8IZU1 332 aaPredicted RBP11.81□□□□□ -0.52
PPFIBP1-202ENST00000318304 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
PPFIBP1-202ENST00000318304 EHMT2Q96KQ7 1210 aa11.78□□□□□ -0.52
PPFIBP1-202ENST00000318304 MYT1Q01538 1121 aa11.76□□□□□ -0.53
PPFIBP1-202ENST00000318304 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
PPFIBP1-202ENST00000318304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
PPFIBP1-202ENST00000318304 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
PPFIBP1-202ENST00000318304 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
PPFIBP1-202ENST00000318304 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
PPFIBP1-202ENST00000318304 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
PPFIBP1-202ENST00000318304 YTHDC1Q96MU7 727 aaKnown RBP11.51□□□□□ -0.57
PPFIBP1-202ENST00000318304 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
PPFIBP1-202ENST00000318304 ABCC9O60706 1549 aa11.48□□□□□ -0.57
PPFIBP1-202ENST00000318304 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
PPFIBP1-202ENST00000318304 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
PPFIBP1-202ENST00000318304 MIER1Q8N108 512 aa11.4□□□□□ -0.58
PPFIBP1-202ENST00000318304 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
PPFIBP1-202ENST00000318304 WRNQ14191 1432 aaPredicted RBP eCLIP11.25□□□□□ -0.61
PPFIBP1-202ENST00000318304 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
PPFIBP1-202ENST00000318304 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
PPFIBP1-202ENST00000318304 CEP162Q5TB80 1403 aa11.22□□□□□ -0.61
PPFIBP1-202ENST00000318304 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
PPFIBP1-202ENST00000318304 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
PPFIBP1-202ENST00000318304 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
PPFIBP1-202ENST00000318304 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
PPFIBP1-202ENST00000318304 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.63
PPFIBP1-202ENST00000318304 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
PPFIBP1-202ENST00000318304 CCDC88BA6NC98 1476 aa11.14□□□□□ -0.63
PPFIBP1-202ENST00000318304 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
PPFIBP1-202ENST00000318304 SOGA1O94964 1423 aa11.12□□□□□ -0.63
PPFIBP1-202ENST00000318304 WIZO95785 1651 aa11.11□□□□□ -0.63
PPFIBP1-202ENST00000318304 CSRNP3Q8WYN3 585 aa11.1□□□□□ -0.63
PPFIBP1-202ENST00000318304 ABCC8Q09428 1581 aa11.09□□□□□ -0.63
PPFIBP1-202ENST00000318304 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
PPFIBP1-202ENST00000318304 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
PPFIBP1-202ENST00000318304 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
PPFIBP1-202ENST00000318304 BCANQ96GW7 911 aa11.01□□□□□ -0.65
PPFIBP1-202ENST00000318304 KCNH8Q96L42 1107 aa11□□□□□ -0.65
PPFIBP1-202ENST00000318304 BAZ1AQ9NRL2 1556 aaPredicted RBP10.97□□□□□ -0.65
PPFIBP1-202ENST00000318304 EEA1Q15075 1411 aa10.95□□□□□ -0.66
PPFIBP1-202ENST00000318304 GOLGA3Q08378 1498 aa10.95□□□□□ -0.66
PPFIBP1-202ENST00000318304 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
PPFIBP1-202ENST00000318304 APLP2Q06481 763 aa10.94□□□□□ -0.66
PPFIBP1-202ENST00000318304 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
PPFIBP1-202ENST00000318304 FKBP8Q14318 412 aa10.92□□□□□ -0.66
PPFIBP1-202ENST00000318304 CLIP1P30622 1438 aa10.92□□□□□ -0.66
PPFIBP1-202ENST00000318304 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
PPFIBP1-202ENST00000318304 VPS8Q8N3P4 1428 aa10.9□□□□□ -0.66
PPFIBP1-202ENST00000318304 NACADO15069 1562 aa10.87□□□□□ -0.67
PPFIBP1-202ENST00000318304 ITGAEP38570 1179 aa10.86□□□□□ -0.67
PPFIBP1-202ENST00000318304 SMARCA2P51531 1590 aa10.85□□□□□ -0.67
PPFIBP1-202ENST00000318304 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
PPFIBP1-202ENST00000318304 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
PPFIBP1-202ENST00000318304 MSH5O43196 834 aa10.82□□□□□ -0.68
PPFIBP1-202ENST00000318304 DDX10Q13206 875 aaKnown RBP10.81□□□□□ -0.68
PPFIBP1-202ENST00000318304 KANK4Q5T7N3 995 aaPredicted RBP10.81□□□□□ -0.68
PPFIBP1-202ENST00000318304 TRIM52Q96A61 297 aa10.8□□□□□ -0.68
PPFIBP1-202ENST00000318304 RAPGEF2Q9Y4G8 1499 aa10.79□□□□□ -0.68
PPFIBP1-202ENST00000318304 NEFLP07196 543 aa10.78□□□□□ -0.68
PPFIBP1-202ENST00000318304 KIF21BO75037 1637 aa10.76□□□□□ -0.69
PPFIBP1-202ENST00000318304 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
PPFIBP1-202ENST00000318304 SMARCA4P51532 1647 aa10.73□□□□□ -0.69
PPFIBP1-202ENST00000318304 SYNJ1O43426 1573 aa10.71□□□□□ -0.69
PPFIBP1-202ENST00000318304 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
PPFIBP1-202ENST00000318304 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
PPFIBP1-202ENST00000318304 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
PPFIBP1-202ENST00000318304 RRBP1Q9P2E9 1410 aaKnown RBP10.68□□□□□ -0.7
PPFIBP1-202ENST00000318304 CCNB3Q8WWL7 1395 aa10.68□□□□□ -0.7
PPFIBP1-202ENST00000318304 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
PPFIBP1-202ENST00000318304 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
PPFIBP1-202ENST00000318304 FANCIQ9NVI1 1328 aa10.66□□□□□ -0.7
PPFIBP1-202ENST00000318304 CUX2O14529 1486 aa10.65□□□□□ -0.7
PPFIBP1-202ENST00000318304 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 ANP32CO43423 234 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 CCER2I3L3R5 266 aa10.64□□□□□ -0.71
PPFIBP1-202ENST00000318304 CDK11AQ9UQ88 783 aaPredicted RBP10.62□□□□□ -0.71
PPFIBP1-202ENST00000318304 DEKP35659 375 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms