RNA–Protein interactions for RNA: ENST00000314475.6

TMEM136-201, Transcript of transmembrane protein 136, humanhuman

TSL 2 BASIC

Gene TMEM136, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-201ENST00000314475 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
TMEM136-201ENST00000314475 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
TMEM136-201ENST00000314475 ABCC9O60706 1549 aa25.19■■□□□ 1.62
TMEM136-201ENST00000314475 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
TMEM136-201ENST00000314475 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
TMEM136-201ENST00000314475 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
TMEM136-201ENST00000314475 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
TMEM136-201ENST00000314475 NACADO15069 1562 aa24.53■■□□□ 1.52
TMEM136-201ENST00000314475 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
TMEM136-201ENST00000314475 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
TMEM136-201ENST00000314475 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
TMEM136-201ENST00000314475 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
TMEM136-201ENST00000314475 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
TMEM136-201ENST00000314475 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
TMEM136-201ENST00000314475 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
TMEM136-201ENST00000314475 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.36
TMEM136-201ENST00000314475 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
TMEM136-201ENST00000314475 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
TMEM136-201ENST00000314475 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
TMEM136-201ENST00000314475 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
TMEM136-201ENST00000314475 MROH2BQ7Z745 1585 aa22.85■■□□□ 1.25
TMEM136-201ENST00000314475 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
TMEM136-201ENST00000314475 RSF1Q96T23 1441 aaPredicted RBP22.74■■□□□ 1.23
TMEM136-201ENST00000314475 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
TMEM136-201ENST00000314475 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
TMEM136-201ENST00000314475 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
TMEM136-201ENST00000314475 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
TMEM136-201ENST00000314475 WIZO95785 1651 aa22.63■■□□□ 1.21
TMEM136-201ENST00000314475 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
TMEM136-201ENST00000314475 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
TMEM136-201ENST00000314475 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
TMEM136-201ENST00000314475 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
TMEM136-201ENST00000314475 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
TMEM136-201ENST00000314475 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.14
TMEM136-201ENST00000314475 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
TMEM136-201ENST00000314475 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
TMEM136-201ENST00000314475 CFTRP13569 1480 aa21.93■■□□□ 1.1
TMEM136-201ENST00000314475 NESP48681 1621 aa21.91■■□□□ 1.1
TMEM136-201ENST00000314475 PRDM2Q13029 1718 aa21.85■■□□□ 1.09
TMEM136-201ENST00000314475 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
TMEM136-201ENST00000314475 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
TMEM136-201ENST00000314475 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
TMEM136-201ENST00000314475 ERCC6Q03468 1493 aa21.69■■□□□ 1.06
TMEM136-201ENST00000314475 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
TMEM136-201ENST00000314475 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
TMEM136-201ENST00000314475 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
TMEM136-201ENST00000314475 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
TMEM136-201ENST00000314475 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
TMEM136-201ENST00000314475 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
TMEM136-201ENST00000314475 WDR62O43379 1518 aa21.45■■□□□ 1.03
TMEM136-201ENST00000314475 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.03
TMEM136-201ENST00000314475 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
TMEM136-201ENST00000314475 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
TMEM136-201ENST00000314475 CUX1P39880 1505 aa21.42■■□□□ 1.02
TMEM136-201ENST00000314475 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
TMEM136-201ENST00000314475 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
TMEM136-201ENST00000314475 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
TMEM136-201ENST00000314475 CUX2O14529 1486 aa21.32■■□□□ 1
TMEM136-201ENST00000314475 FGD5Q6ZNL6 1462 aa21.28■■□□□ 1
TMEM136-201ENST00000314475 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
TMEM136-201ENST00000314475 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
TMEM136-201ENST00000314475 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
TMEM136-201ENST00000314475 SENP3Q9H4L4 574 aaPredicted RBP21.19■□□□□ 0.98
TMEM136-201ENST00000314475 SOGA1O94964 1423 aa21.18■□□□□ 0.98
TMEM136-201ENST00000314475 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
TMEM136-201ENST00000314475 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
TMEM136-201ENST00000314475 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
TMEM136-201ENST00000314475 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
TMEM136-201ENST00000314475 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
TMEM136-201ENST00000314475 TDRD9Q8NDG6 1382 aaKnown RBP21■□□□□ 0.95
TMEM136-201ENST00000314475 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
TMEM136-201ENST00000314475 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
TMEM136-201ENST00000314475 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
TMEM136-201ENST00000314475 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.95
TMEM136-201ENST00000314475 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
TMEM136-201ENST00000314475 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
TMEM136-201ENST00000314475 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
TMEM136-201ENST00000314475 EEA1Q15075 1411 aa20.89■□□□□ 0.93
TMEM136-201ENST00000314475 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
TMEM136-201ENST00000314475 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
TMEM136-201ENST00000314475 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
TMEM136-201ENST00000314475 IGF1RP08069 1367 aa20.81■□□□□ 0.92
TMEM136-201ENST00000314475 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
TMEM136-201ENST00000314475 CUL7Q14999 1698 aa20.78■□□□□ 0.92
TMEM136-201ENST00000314475 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
TMEM136-201ENST00000314475 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
TMEM136-201ENST00000314475 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
TMEM136-201ENST00000314475 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
TMEM136-201ENST00000314475 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
TMEM136-201ENST00000314475 CARMIL1Q5VZK9 1371 aa20.71■□□□□ 0.91
TMEM136-201ENST00000314475 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
TMEM136-201ENST00000314475 CHD1O14646 1710 aa20.66■□□□□ 0.9
TMEM136-201ENST00000314475 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
TMEM136-201ENST00000314475 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.9
TMEM136-201ENST00000314475 GRIN2AQ12879 1464 aa20.63■□□□□ 0.89
TMEM136-201ENST00000314475 FBLN2P98095 1184 aa20.63■□□□□ 0.89
TMEM136-201ENST00000314475 KIF21BO75037 1637 aa20.63■□□□□ 0.89
TMEM136-201ENST00000314475 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
TMEM136-201ENST00000314475 NUP160Q12769 1436 aa20.52■□□□□ 0.88
TMEM136-201ENST00000314475 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms