RNA–Protein interactions for RNA: ENST00000313566.10

AP4S1-202, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 3 BASIC

Gene AP4S1, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-202ENST00000313566 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
AP4S1-202ENST00000313566 CCDC180Q9P1Z9 1646 aa36.98■■■■□ 3.51
AP4S1-202ENST00000313566 ABCC9O60706 1549 aa35.98■■■■□ 3.35
AP4S1-202ENST00000313566 NACADO15069 1562 aa34.77■■■■□ 3.16
AP4S1-202ENST00000313566 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
AP4S1-202ENST00000313566 DCAF8L2P0C7V8 631 aa34.68■■■■□ 3.14
AP4S1-202ENST00000313566 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
AP4S1-202ENST00000313566 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
AP4S1-202ENST00000313566 DCAF1Q9Y4B6 1507 aa34.51■■■■□ 3.12
AP4S1-202ENST00000313566 UNC13AQ9UPW8 1703 aa33.9■■■■□ 3.02
AP4S1-202ENST00000313566 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.98
AP4S1-202ENST00000313566 BICRAQ9NZM4 1560 aa33.64■■■□□ 2.98
AP4S1-202ENST00000313566 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
AP4S1-202ENST00000313566 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
AP4S1-202ENST00000313566 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
AP4S1-202ENST00000313566 EIF4G1Q04637 1599 aaKnown RBP32.75■■■□□ 2.83
AP4S1-202ENST00000313566 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
AP4S1-202ENST00000313566 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
AP4S1-202ENST00000313566 BAZ1AQ9NRL2 1556 aaPredicted RBP32.27■■■□□ 2.76
AP4S1-202ENST00000313566 SMARCA4P51532 1647 aa32.24■■■□□ 2.75
AP4S1-202ENST00000313566 NCAPD3P42695 1498 aa32.08■■■□□ 2.73
AP4S1-202ENST00000313566 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
AP4S1-202ENST00000313566 ATAD2BQ9ULI0 1458 aa32.06■■■□□ 2.72
AP4S1-202ENST00000313566 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
AP4S1-202ENST00000313566 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
AP4S1-202ENST00000313566 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
AP4S1-202ENST00000313566 BAZ1BQ9UIG0 1483 aaKnown RBP31.8■■■□□ 2.68
AP4S1-202ENST00000313566 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
AP4S1-202ENST00000313566 WIZO95785 1651 aa31.67■■■□□ 2.66
AP4S1-202ENST00000313566 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
AP4S1-202ENST00000313566 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
AP4S1-202ENST00000313566 NESP48681 1621 aa31.15■■■□□ 2.58
AP4S1-202ENST00000313566 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
AP4S1-202ENST00000313566 ERCC6Q03468 1493 aa31.06■■■□□ 2.56
AP4S1-202ENST00000313566 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
AP4S1-202ENST00000313566 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
AP4S1-202ENST00000313566 CFTRP13569 1480 aa30.96■■■□□ 2.55
AP4S1-202ENST00000313566 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.55
AP4S1-202ENST00000313566 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
AP4S1-202ENST00000313566 CUX2O14529 1486 aa30.75■■■□□ 2.51
AP4S1-202ENST00000313566 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
AP4S1-202ENST00000313566 PRDM2Q13029 1718 aa30.73■■■□□ 2.51
AP4S1-202ENST00000313566 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
AP4S1-202ENST00000313566 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
AP4S1-202ENST00000313566 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
AP4S1-202ENST00000313566 WDR62O43379 1518 aa30.52■■■□□ 2.48
AP4S1-202ENST00000313566 URB2Q14146 1524 aaKnown RBP30.4■■■□□ 2.46
AP4S1-202ENST00000313566 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
AP4S1-202ENST00000313566 TOPBP1Q92547 1522 aa30.26■■■□□ 2.43
AP4S1-202ENST00000313566 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
AP4S1-202ENST00000313566 IFT140Q96RY7 1462 aa30.07■■■□□ 2.4
AP4S1-202ENST00000313566 CUX1P39880 1505 aa30.04■■■□□ 2.4
AP4S1-202ENST00000313566 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
AP4S1-202ENST00000313566 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
AP4S1-202ENST00000313566 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
AP4S1-202ENST00000313566 SOGA1O94964 1423 aa29.91■■■□□ 2.38
AP4S1-202ENST00000313566 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
AP4S1-202ENST00000313566 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
AP4S1-202ENST00000313566 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
AP4S1-202ENST00000313566 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
AP4S1-202ENST00000313566 RAD54L2Q9Y4B4 1467 aa29.82■■■□□ 2.36
AP4S1-202ENST00000313566 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
AP4S1-202ENST00000313566 WDR97A6NE52 1622 aa29.77■■■□□ 2.36
AP4S1-202ENST00000313566 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
AP4S1-202ENST00000313566 AQRO60306 1485 aaKnown RBP eCLIP29.72■■■□□ 2.35
AP4S1-202ENST00000313566 DNAJC5Q9H3Z4 198 aa29.7■■■□□ 2.35
AP4S1-202ENST00000313566 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
AP4S1-202ENST00000313566 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
AP4S1-202ENST00000313566 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
AP4S1-202ENST00000313566 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
AP4S1-202ENST00000313566 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
AP4S1-202ENST00000313566 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
AP4S1-202ENST00000313566 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
AP4S1-202ENST00000313566 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
AP4S1-202ENST00000313566 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
AP4S1-202ENST00000313566 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
AP4S1-202ENST00000313566 CHD1O14646 1710 aa29.35■■■□□ 2.29
AP4S1-202ENST00000313566 FBLN2P98095 1184 aa29.35■■■□□ 2.29
AP4S1-202ENST00000313566 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
AP4S1-202ENST00000313566 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
AP4S1-202ENST00000313566 KIF27Q86VH2 1401 aa29.32■■■□□ 2.28
AP4S1-202ENST00000313566 TRIM41Q8WV44 630 aa29.3■■■□□ 2.28
AP4S1-202ENST00000313566 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
AP4S1-202ENST00000313566 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
AP4S1-202ENST00000313566 IGF1RP08069 1367 aa29.18■■■□□ 2.26
AP4S1-202ENST00000313566 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
AP4S1-202ENST00000313566 CUL7Q14999 1698 aa29.09■■■□□ 2.25
AP4S1-202ENST00000313566 CLASP1Q7Z460 1538 aa29.07■■■□□ 2.24
AP4S1-202ENST00000313566 NUP160Q12769 1436 aa29.03■■■□□ 2.24
AP4S1-202ENST00000313566 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.24
AP4S1-202ENST00000313566 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
AP4S1-202ENST00000313566 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
AP4S1-202ENST00000313566 CEP170Q5SW79 1584 aa28.96■■■□□ 2.23
AP4S1-202ENST00000313566 ARHGEF11O15085 1522 aa28.95■■■□□ 2.23
AP4S1-202ENST00000313566 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
AP4S1-202ENST00000313566 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
AP4S1-202ENST00000313566 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
AP4S1-202ENST00000313566 EEA1Q15075 1411 aa28.87■■■□□ 2.21
AP4S1-202ENST00000313566 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
AP4S1-202ENST00000313566 KIAA0586Q9BVV6 1533 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms