RNA–Protein interactions for RNA: ENST00000311946.7

NIPAL4-201, Transcript of NIPA like domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NIPAL4, Length 3,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-201ENST00000311946 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
NIPAL4-201ENST00000311946 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
NIPAL4-201ENST00000311946 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
NIPAL4-201ENST00000311946 HRCP23327 699 aa26.6■■□□□ 1.85
NIPAL4-201ENST00000311946 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
NIPAL4-201ENST00000311946 PCGF6Q9BYE7 350 aa26.35■■□□□ 1.81
NIPAL4-201ENST00000311946 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
NIPAL4-201ENST00000311946 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
NIPAL4-201ENST00000311946 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.69
NIPAL4-201ENST00000311946 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
NIPAL4-201ENST00000311946 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
NIPAL4-201ENST00000311946 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.64
NIPAL4-201ENST00000311946 TRIM26Q12899 539 aaPredicted RBP25.3■■□□□ 1.64
NIPAL4-201ENST00000311946 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
NIPAL4-201ENST00000311946 SCAF1Q9H7N4 1312 aaKnown RBP25.2■■□□□ 1.63
NIPAL4-201ENST00000311946 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
NIPAL4-201ENST00000311946 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
NIPAL4-201ENST00000311946 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
NIPAL4-201ENST00000311946 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
NIPAL4-201ENST00000311946 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
NIPAL4-201ENST00000311946 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
NIPAL4-201ENST00000311946 ACIN1Q9UKV3 1341 aaKnown RBP24.54■■□□□ 1.52
NIPAL4-201ENST00000311946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.49■■□□□ 1.51
NIPAL4-201ENST00000311946 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
NIPAL4-201ENST00000311946 CCER1Q8TC90 406 aaPredicted RBP24.36■■□□□ 1.49
NIPAL4-201ENST00000311946 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
NIPAL4-201ENST00000311946 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
NIPAL4-201ENST00000311946 CENPBP07199 599 aaPredicted RBP24.21■■□□□ 1.47
NIPAL4-201ENST00000311946 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
NIPAL4-201ENST00000311946 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
NIPAL4-201ENST00000311946 MYT1Q01538 1121 aa24.08■■□□□ 1.45
NIPAL4-201ENST00000311946 ABCC9O60706 1549 aa24.07■■□□□ 1.44
NIPAL4-201ENST00000311946 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
NIPAL4-201ENST00000311946 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
NIPAL4-201ENST00000311946 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
NIPAL4-201ENST00000311946 MIER1Q8N108 512 aa23.71■■□□□ 1.39
NIPAL4-201ENST00000311946 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
NIPAL4-201ENST00000311946 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
NIPAL4-201ENST00000311946 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
NIPAL4-201ENST00000311946 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
NIPAL4-201ENST00000311946 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
NIPAL4-201ENST00000311946 WIZO95785 1651 aa23.4■■□□□ 1.34
NIPAL4-201ENST00000311946 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
NIPAL4-201ENST00000311946 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
NIPAL4-201ENST00000311946 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NIPAL4-201ENST00000311946 SOGA1O94964 1423 aa23.28■■□□□ 1.32
NIPAL4-201ENST00000311946 SUPT16HQ9Y5B9 1047 aaKnown RBP23.23■■□□□ 1.31
NIPAL4-201ENST00000311946 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
NIPAL4-201ENST00000311946 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
NIPAL4-201ENST00000311946 RANGAP1P46060 587 aaPredicted RBP23.16■■□□□ 1.3
NIPAL4-201ENST00000311946 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
NIPAL4-201ENST00000311946 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
NIPAL4-201ENST00000311946 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
NIPAL4-201ENST00000311946 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
NIPAL4-201ENST00000311946 BCANQ96GW7 911 aa23.01■■□□□ 1.27
NIPAL4-201ENST00000311946 ANP32EQ9BTT0 268 aa23.01■■□□□ 1.27
NIPAL4-201ENST00000311946 APLP2Q06481 763 aa22.95■■□□□ 1.27
NIPAL4-201ENST00000311946 BCL11AQ9H165 835 aa22.95■■□□□ 1.26
NIPAL4-201ENST00000311946 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
NIPAL4-201ENST00000311946 GOLGA3Q08378 1498 aa22.91■■□□□ 1.26
NIPAL4-201ENST00000311946 NACADO15069 1562 aa22.85■■□□□ 1.25
NIPAL4-201ENST00000311946 CLIP1P30622 1438 aa22.83■■□□□ 1.25
NIPAL4-201ENST00000311946 CLSPNQ9HAW4 1339 aa22.83■■□□□ 1.24
NIPAL4-201ENST00000311946 EEA1Q15075 1411 aa22.8■■□□□ 1.24
NIPAL4-201ENST00000311946 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
NIPAL4-201ENST00000311946 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
NIPAL4-201ENST00000311946 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
NIPAL4-201ENST00000311946 FKBP8Q14318 412 aa22.74■■□□□ 1.23
NIPAL4-201ENST00000311946 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
NIPAL4-201ENST00000311946 ITGAEP38570 1179 aa22.69■■□□□ 1.22
NIPAL4-201ENST00000311946 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
NIPAL4-201ENST00000311946 KANK4Q5T7N3 995 aaPredicted RBP22.6■■□□□ 1.21
NIPAL4-201ENST00000311946 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
NIPAL4-201ENST00000311946 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
NIPAL4-201ENST00000311946 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
NIPAL4-201ENST00000311946 DDX10Q13206 875 aaKnown RBP22.55■■□□□ 1.2
NIPAL4-201ENST00000311946 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
NIPAL4-201ENST00000311946 KIF21BO75037 1637 aa22.52■■□□□ 1.19
NIPAL4-201ENST00000311946 HIRIP3Q9BW71 556 aaPredicted RBP22.5■■□□□ 1.19
NIPAL4-201ENST00000311946 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
NIPAL4-201ENST00000311946 NEFLP07196 543 aa22.46■■□□□ 1.19
NIPAL4-201ENST00000311946 MSH5O43196 834 aa22.39■■□□□ 1.17
NIPAL4-201ENST00000311946 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
NIPAL4-201ENST00000311946 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
NIPAL4-201ENST00000311946 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
NIPAL4-201ENST00000311946 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
NIPAL4-201ENST00000311946 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
NIPAL4-201ENST00000311946 CCNB3Q8WWL7 1395 aa22.27■■□□□ 1.16
NIPAL4-201ENST00000311946 RAB3GAP2Q9H2M9 1393 aa22.27■■□□□ 1.16
NIPAL4-201ENST00000311946 RRBP1Q9P2E9 1410 aaKnown RBP22.23■■□□□ 1.15
NIPAL4-201ENST00000311946 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
NIPAL4-201ENST00000311946 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
NIPAL4-201ENST00000311946 PPP1R15AO75807 674 aaPredicted RBP22.21■■□□□ 1.15
NIPAL4-201ENST00000311946 ANP32CO43423 234 aa22.19■■□□□ 1.14
NIPAL4-201ENST00000311946 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
NIPAL4-201ENST00000311946 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.14
NIPAL4-201ENST00000311946 CUX2O14529 1486 aa22.1■■□□□ 1.13
NIPAL4-201ENST00000311946 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
NIPAL4-201ENST00000311946 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.13
NIPAL4-201ENST00000311946 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms