RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
ZC3HC1-201ENST00000311873 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
ZC3HC1-201ENST00000311873 ABCC9O60706 1549 aa23.01■■□□□ 1.27
ZC3HC1-201ENST00000311873 ZCCHC6Q5VYS8 1495 aaKnown RBP22.74■■□□□ 1.23
ZC3HC1-201ENST00000311873 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
ZC3HC1-201ENST00000311873 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
ZC3HC1-201ENST00000311873 NACADO15069 1562 aa22.28■■□□□ 1.16
ZC3HC1-201ENST00000311873 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
ZC3HC1-201ENST00000311873 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
ZC3HC1-201ENST00000311873 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
ZC3HC1-201ENST00000311873 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
ZC3HC1-201ENST00000311873 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
ZC3HC1-201ENST00000311873 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
ZC3HC1-201ENST00000311873 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
ZC3HC1-201ENST00000311873 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
ZC3HC1-201ENST00000311873 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
ZC3HC1-201ENST00000311873 EIF4G1Q04637 1599 aaKnown RBP20.98■□□□□ 0.95
ZC3HC1-201ENST00000311873 SMARCA4P51532 1647 aa20.98■□□□□ 0.95
ZC3HC1-201ENST00000311873 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
ZC3HC1-201ENST00000311873 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
ZC3HC1-201ENST00000311873 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
ZC3HC1-201ENST00000311873 WIZO95785 1651 aa20.83■□□□□ 0.92
ZC3HC1-201ENST00000311873 CC2D2AQ9P2K1 1620 aa20.79■□□□□ 0.92
ZC3HC1-201ENST00000311873 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
ZC3HC1-201ENST00000311873 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
ZC3HC1-201ENST00000311873 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
ZC3HC1-201ENST00000311873 SMARCA2P51531 1590 aa20.66■□□□□ 0.9
ZC3HC1-201ENST00000311873 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
ZC3HC1-201ENST00000311873 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
ZC3HC1-201ENST00000311873 TOP2AP11388 1531 aaKnown RBP20.55■□□□□ 0.88
ZC3HC1-201ENST00000311873 HMGXB3Q12766 1538 aa20.52■□□□□ 0.88
ZC3HC1-201ENST00000311873 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
ZC3HC1-201ENST00000311873 NESP48681 1621 aa20.1■□□□□ 0.81
ZC3HC1-201ENST00000311873 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
ZC3HC1-201ENST00000311873 CFTRP13569 1480 aa20.03■□□□□ 0.8
ZC3HC1-201ENST00000311873 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
ZC3HC1-201ENST00000311873 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
ZC3HC1-201ENST00000311873 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
ZC3HC1-201ENST00000311873 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
ZC3HC1-201ENST00000311873 KIF21AQ7Z4S6 1674 aa19.83■□□□□ 0.76
ZC3HC1-201ENST00000311873 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
ZC3HC1-201ENST00000311873 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
ZC3HC1-201ENST00000311873 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
ZC3HC1-201ENST00000311873 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
ZC3HC1-201ENST00000311873 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
ZC3HC1-201ENST00000311873 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
ZC3HC1-201ENST00000311873 CUX1P39880 1505 aa19.67■□□□□ 0.74
ZC3HC1-201ENST00000311873 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
ZC3HC1-201ENST00000311873 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
ZC3HC1-201ENST00000311873 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
ZC3HC1-201ENST00000311873 TRIM41Q8WV44 630 aa19.59■□□□□ 0.73
ZC3HC1-201ENST00000311873 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
ZC3HC1-201ENST00000311873 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
ZC3HC1-201ENST00000311873 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
ZC3HC1-201ENST00000311873 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
ZC3HC1-201ENST00000311873 WDR62O43379 1518 aa19.53■□□□□ 0.72
ZC3HC1-201ENST00000311873 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
ZC3HC1-201ENST00000311873 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
ZC3HC1-201ENST00000311873 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
ZC3HC1-201ENST00000311873 CUX2O14529 1486 aa19.41■□□□□ 0.7
ZC3HC1-201ENST00000311873 SOGA1O94964 1423 aa19.37■□□□□ 0.69
ZC3HC1-201ENST00000311873 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
ZC3HC1-201ENST00000311873 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
ZC3HC1-201ENST00000311873 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
ZC3HC1-201ENST00000311873 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
ZC3HC1-201ENST00000311873 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
ZC3HC1-201ENST00000311873 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
ZC3HC1-201ENST00000311873 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
ZC3HC1-201ENST00000311873 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
ZC3HC1-201ENST00000311873 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.673e-6■■■□□ 16.9
ZC3HC1-201ENST00000311873 ABCA5Q8WWZ7 1642 aa19.2■□□□□ 0.66
ZC3HC1-201ENST00000311873 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
ZC3HC1-201ENST00000311873 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
ZC3HC1-201ENST00000311873 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
ZC3HC1-201ENST00000311873 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
ZC3HC1-201ENST00000311873 IGF1RP08069 1367 aa19.11■□□□□ 0.65
ZC3HC1-201ENST00000311873 PBRM1Q86U86 1689 aa19.1■□□□□ 0.65
ZC3HC1-201ENST00000311873 EEA1Q15075 1411 aa19.1■□□□□ 0.65
ZC3HC1-201ENST00000311873 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
ZC3HC1-201ENST00000311873 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
ZC3HC1-201ENST00000311873 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
ZC3HC1-201ENST00000311873 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
ZC3HC1-201ENST00000311873 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
ZC3HC1-201ENST00000311873 PRXQ9BXM0 1461 aa19■□□□□ 0.63
ZC3HC1-201ENST00000311873 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
ZC3HC1-201ENST00000311873 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
ZC3HC1-201ENST00000311873 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
ZC3HC1-201ENST00000311873 CUL7Q14999 1698 aa18.96■□□□□ 0.63
ZC3HC1-201ENST00000311873 KIF21BO75037 1637 aa18.95■□□□□ 0.62
ZC3HC1-201ENST00000311873 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
ZC3HC1-201ENST00000311873 FHAD1B1AJZ9 1412 aa18.92■□□□□ 0.62
ZC3HC1-201ENST00000311873 FBLN2P98095 1184 aa18.89■□□□□ 0.61
ZC3HC1-201ENST00000311873 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
ZC3HC1-201ENST00000311873 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
ZC3HC1-201ENST00000311873 CHD1O14646 1710 aa18.85■□□□□ 0.61
ZC3HC1-201ENST00000311873 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
ZC3HC1-201ENST00000311873 GRIN2AQ12879 1464 aa18.84■□□□□ 0.61
ZC3HC1-201ENST00000311873 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
ZC3HC1-201ENST00000311873 CEP170Q5SW79 1584 aa18.78■□□□□ 0.6
ZC3HC1-201ENST00000311873 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms