RNA–Protein interactions for RNA: ENST00000310999.11

MRPL11-201, Transcript of mitochondrial ribosomal protein L11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL11, Length 1,605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL11-201ENST00000310999 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
MRPL11-201ENST00000310999 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
MRPL11-201ENST00000310999 ABCC9O60706 1549 aa32.06■■■□□ 2.72
MRPL11-201ENST00000310999 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
MRPL11-201ENST00000310999 NACADO15069 1562 aa30.89■■■□□ 2.54
MRPL11-201ENST00000310999 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
MRPL11-201ENST00000310999 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
MRPL11-201ENST00000310999 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
MRPL11-201ENST00000310999 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
MRPL11-201ENST00000310999 PABPN1Q86U42 306 aaKnown RBP eCLIP30.04■■■□□ 2.4
MRPL11-201ENST00000310999 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
MRPL11-201ENST00000310999 SCRIBQ14160 1630 aa29.94■■■□□ 2.38
MRPL11-201ENST00000310999 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
MRPL11-201ENST00000310999 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
MRPL11-201ENST00000310999 DNAJC5BQ9UF47 199 aa29.35■■■□□ 2.29
MRPL11-201ENST00000310999 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.25
MRPL11-201ENST00000310999 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
MRPL11-201ENST00000310999 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
MRPL11-201ENST00000310999 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
MRPL11-201ENST00000310999 SMARCA4P51532 1647 aa28.66■■■□□ 2.18
MRPL11-201ENST00000310999 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
MRPL11-201ENST00000310999 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
MRPL11-201ENST00000310999 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
MRPL11-201ENST00000310999 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
MRPL11-201ENST00000310999 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
MRPL11-201ENST00000310999 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
MRPL11-201ENST00000310999 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
MRPL11-201ENST00000310999 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
MRPL11-201ENST00000310999 WIZO95785 1651 aa28.15■■■□□ 2.1
MRPL11-201ENST00000310999 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
MRPL11-201ENST00000310999 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
MRPL11-201ENST00000310999 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
MRPL11-201ENST00000310999 NESP48681 1621 aa27.75■■■□□ 2.03
MRPL11-201ENST00000310999 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
MRPL11-201ENST00000310999 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
MRPL11-201ENST00000310999 ERCC6Q03468 1493 aa27.68■■■□□ 2.02
MRPL11-201ENST00000310999 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
MRPL11-201ENST00000310999 PDS5BQ9NTI5 1447 aa27.62■■■□□ 2.01
MRPL11-201ENST00000310999 CFTRP13569 1480 aa27.58■■■□□ 2.01
MRPL11-201ENST00000310999 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.97
MRPL11-201ENST00000310999 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
MRPL11-201ENST00000310999 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
MRPL11-201ENST00000310999 CUX2O14529 1486 aa27.33■■□□□ 1.97
MRPL11-201ENST00000310999 KIF21AQ7Z4S6 1674 aa27.31■■□□□ 1.96
MRPL11-201ENST00000310999 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
MRPL11-201ENST00000310999 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
MRPL11-201ENST00000310999 WDR62O43379 1518 aa27.14■■□□□ 1.94
MRPL11-201ENST00000310999 PRDM2Q13029 1718 aa27.14■■□□□ 1.94
MRPL11-201ENST00000310999 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
MRPL11-201ENST00000310999 ABCC8Q09428 1581 aa27■■□□□ 1.91
MRPL11-201ENST00000310999 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
MRPL11-201ENST00000310999 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.9
MRPL11-201ENST00000310999 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
MRPL11-201ENST00000310999 CUX1P39880 1505 aa26.75■■□□□ 1.87
MRPL11-201ENST00000310999 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
MRPL11-201ENST00000310999 WRNQ14191 1432 aaPredicted RBP eCLIP26.7■■□□□ 1.86
MRPL11-201ENST00000310999 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
MRPL11-201ENST00000310999 SOGA1O94964 1423 aa26.66■■□□□ 1.86
MRPL11-201ENST00000310999 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
MRPL11-201ENST00000310999 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
MRPL11-201ENST00000310999 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
MRPL11-201ENST00000310999 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
MRPL11-201ENST00000310999 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
MRPL11-201ENST00000310999 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.83
MRPL11-201ENST00000310999 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
MRPL11-201ENST00000310999 BIVM-ERCC5R4GMW8 1640 aa26.49■■□□□ 1.83
MRPL11-201ENST00000310999 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
MRPL11-201ENST00000310999 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
MRPL11-201ENST00000310999 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
MRPL11-201ENST00000310999 DNAJC5Q9H3Z4 198 aa26.4■■□□□ 1.82
MRPL11-201ENST00000310999 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
MRPL11-201ENST00000310999 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
MRPL11-201ENST00000310999 OSCARQ8IYS5 282 aa26.3■■□□□ 1.8
MRPL11-201ENST00000310999 ABCA5Q8WWZ7 1642 aa26.24■■□□□ 1.79
MRPL11-201ENST00000310999 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
MRPL11-201ENST00000310999 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
MRPL11-201ENST00000310999 FBLN2P98095 1184 aa26.23■■□□□ 1.79
MRPL11-201ENST00000310999 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
MRPL11-201ENST00000310999 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
MRPL11-201ENST00000310999 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
MRPL11-201ENST00000310999 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
MRPL11-201ENST00000310999 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
MRPL11-201ENST00000310999 PBRM1Q86U86 1689 aa26.1■■□□□ 1.77
MRPL11-201ENST00000310999 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
MRPL11-201ENST00000310999 IGF1RP08069 1367 aa26.03■■□□□ 1.76
MRPL11-201ENST00000310999 CHD1O14646 1710 aa26■■□□□ 1.75
MRPL11-201ENST00000310999 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
MRPL11-201ENST00000310999 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
MRPL11-201ENST00000310999 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.73
MRPL11-201ENST00000310999 NUP160Q12769 1436 aa25.86■■□□□ 1.73
MRPL11-201ENST00000310999 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
MRPL11-201ENST00000310999 CUL7Q14999 1698 aa25.84■■□□□ 1.73
MRPL11-201ENST00000310999 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
MRPL11-201ENST00000310999 CEP170Q5SW79 1584 aa25.76■■□□□ 1.71
MRPL11-201ENST00000310999 ARHGEF11O15085 1522 aa25.76■■□□□ 1.71
MRPL11-201ENST00000310999 EEA1Q15075 1411 aa25.74■■□□□ 1.71
MRPL11-201ENST00000310999 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
MRPL11-201ENST00000310999 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
MRPL11-201ENST00000310999 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
MRPL11-201ENST00000310999 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms