RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
VANGL1-201ENST00000310260 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
VANGL1-201ENST00000310260 ABCC9O60706 1549 aa24.67■■□□□ 1.54
VANGL1-201ENST00000310260 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
VANGL1-201ENST00000310260 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
VANGL1-201ENST00000310260 NACADO15069 1562 aa23.74■■□□□ 1.39
VANGL1-201ENST00000310260 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
VANGL1-201ENST00000310260 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
VANGL1-201ENST00000310260 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
VANGL1-201ENST00000310260 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
VANGL1-201ENST00000310260 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
VANGL1-201ENST00000310260 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
VANGL1-201ENST00000310260 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
VANGL1-201ENST00000310260 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
VANGL1-201ENST00000310260 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
VANGL1-201ENST00000310260 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
VANGL1-201ENST00000310260 EIF4G1Q04637 1599 aaKnown RBP22.37■■□□□ 1.17
VANGL1-201ENST00000310260 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
VANGL1-201ENST00000310260 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
VANGL1-201ENST00000310260 SMARCA4P51532 1647 aa22.23■■□□□ 1.15
VANGL1-201ENST00000310260 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
VANGL1-201ENST00000310260 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
VANGL1-201ENST00000310260 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
VANGL1-201ENST00000310260 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
VANGL1-201ENST00000310260 WIZO95785 1651 aa22.03■■□□□ 1.12
VANGL1-201ENST00000310260 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
VANGL1-201ENST00000310260 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
VANGL1-201ENST00000310260 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
VANGL1-201ENST00000310260 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
VANGL1-201ENST00000310260 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
VANGL1-201ENST00000310260 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
VANGL1-201ENST00000310260 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
VANGL1-201ENST00000310260 NESP48681 1621 aa21.45■■□□□ 1.02
VANGL1-201ENST00000310260 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
VANGL1-201ENST00000310260 CFTRP13569 1480 aa21.3■■□□□ 1
VANGL1-201ENST00000310260 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
VANGL1-201ENST00000310260 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
VANGL1-201ENST00000310260 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
VANGL1-201ENST00000310260 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
VANGL1-201ENST00000310260 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.97
VANGL1-201ENST00000310260 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.96
VANGL1-201ENST00000310260 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
VANGL1-201ENST00000310260 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
VANGL1-201ENST00000310260 HRCP23327 699 aa20.94■□□□□ 0.94
VANGL1-201ENST00000310260 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
VANGL1-201ENST00000310260 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
VANGL1-201ENST00000310260 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
VANGL1-201ENST00000310260 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
VANGL1-201ENST00000310260 CUX1P39880 1505 aa20.84■□□□□ 0.93
VANGL1-201ENST00000310260 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
VANGL1-201ENST00000310260 TRIM41Q8WV44 630 aa20.83■□□□□ 0.92
VANGL1-201ENST00000310260 WDR62O43379 1518 aa20.79■□□□□ 0.92
VANGL1-201ENST00000310260 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
VANGL1-201ENST00000310260 CHIC1Q5VXU3 224 aa20.78■□□□□ 0.92
VANGL1-201ENST00000310260 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
VANGL1-201ENST00000310260 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
VANGL1-201ENST00000310260 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
VANGL1-201ENST00000310260 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
VANGL1-201ENST00000310260 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
VANGL1-201ENST00000310260 SOGA1O94964 1423 aa20.69■□□□□ 0.9
VANGL1-201ENST00000310260 CUX2O14529 1486 aa20.68■□□□□ 0.9
VANGL1-201ENST00000310260 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
VANGL1-201ENST00000310260 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
VANGL1-201ENST00000310260 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
VANGL1-201ENST00000310260 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
VANGL1-201ENST00000310260 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.886e-6■■■■□ 25.1
VANGL1-201ENST00000310260 FAM9AQ8IZU1 332 aaPredicted RBP20.53■□□□□ 0.88
VANGL1-201ENST00000310260 TARBP1Q13395 1621 aaKnown RBP20.52■□□□□ 0.88
VANGL1-201ENST00000310260 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
VANGL1-201ENST00000310260 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
VANGL1-201ENST00000310260 PPARGC1BQ86YN6 1023 aaKnown RBP20.42■□□□□ 0.86
VANGL1-201ENST00000310260 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
VANGL1-201ENST00000310260 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
VANGL1-201ENST00000310260 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.86
VANGL1-201ENST00000310260 EIF4G3O43432 1585 aaKnown RBP20.39■□□□□ 0.86
VANGL1-201ENST00000310260 FBLN2P98095 1184 aa20.39■□□□□ 0.85
VANGL1-201ENST00000310260 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
VANGL1-201ENST00000310260 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
VANGL1-201ENST00000310260 GRIN2BQ13224 1484 aa20.33■□□□□ 0.84
VANGL1-201ENST00000310260 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
VANGL1-201ENST00000310260 IGF1RP08069 1367 aa20.31■□□□□ 0.84
VANGL1-201ENST00000310260 CSRNP3Q8WYN3 585 aa20.29■□□□□ 0.84
VANGL1-201ENST00000310260 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
VANGL1-201ENST00000310260 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
VANGL1-201ENST00000310260 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
VANGL1-201ENST00000310260 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
VANGL1-201ENST00000310260 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
VANGL1-201ENST00000310260 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
VANGL1-201ENST00000310260 EEA1Q15075 1411 aa20.19■□□□□ 0.82
VANGL1-201ENST00000310260 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
VANGL1-201ENST00000310260 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
VANGL1-201ENST00000310260 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
VANGL1-201ENST00000310260 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
VANGL1-201ENST00000310260 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
VANGL1-201ENST00000310260 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.81
VANGL1-201ENST00000310260 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
VANGL1-201ENST00000310260 CUL7Q14999 1698 aa20.08■□□□□ 0.8
VANGL1-201ENST00000310260 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
VANGL1-201ENST00000310260 GRIN2AQ12879 1464 aa20.07■□□□□ 0.8
VANGL1-201ENST00000310260 CHD1O14646 1710 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms