RNA–Protein interactions for RNA: ENST00000309481.11

GSDMB-201, Transcript of gasdermin B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GSDMB, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-201ENST00000309481 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
GSDMB-201ENST00000309481 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
GSDMB-201ENST00000309481 ZCCHC6Q5VYS8 1495 aaKnown RBP25.45■■□□□ 1.66
GSDMB-201ENST00000309481 ABCC9O60706 1549 aa25.33■■□□□ 1.64
GSDMB-201ENST00000309481 DCAF1Q9Y4B6 1507 aa25.16■■□□□ 1.62
GSDMB-201ENST00000309481 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
GSDMB-201ENST00000309481 MYO15BQ96JP2 1530 aa24.99■■□□□ 1.59
GSDMB-201ENST00000309481 NACADO15069 1562 aa24.87■■□□□ 1.57
GSDMB-201ENST00000309481 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
GSDMB-201ENST00000309481 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
GSDMB-201ENST00000309481 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
GSDMB-201ENST00000309481 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
GSDMB-201ENST00000309481 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
GSDMB-201ENST00000309481 PABPN1Q86U42 306 aaKnown RBP eCLIP23.82■■□□□ 1.42e-7■■■□□ 14.9
GSDMB-201ENST00000309481 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
GSDMB-201ENST00000309481 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
GSDMB-201ENST00000309481 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
GSDMB-201ENST00000309481 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
GSDMB-201ENST00000309481 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
GSDMB-201ENST00000309481 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
GSDMB-201ENST00000309481 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
GSDMB-201ENST00000309481 WIZO95785 1651 aa23.17■■□□□ 1.3
GSDMB-201ENST00000309481 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.29
GSDMB-201ENST00000309481 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
GSDMB-201ENST00000309481 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.28
GSDMB-201ENST00000309481 TOP2AP11388 1531 aaKnown RBP22.99■■□□□ 1.27
GSDMB-201ENST00000309481 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
GSDMB-201ENST00000309481 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
GSDMB-201ENST00000309481 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
GSDMB-201ENST00000309481 HMGXB3Q12766 1538 aa22.89■■□□□ 1.26
GSDMB-201ENST00000309481 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
GSDMB-201ENST00000309481 DNAJC5BQ9UF47 199 aa22.56■■□□□ 1.2
GSDMB-201ENST00000309481 CFTRP13569 1480 aa22.35■■□□□ 1.17
GSDMB-201ENST00000309481 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
GSDMB-201ENST00000309481 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
GSDMB-201ENST00000309481 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
GSDMB-201ENST00000309481 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
GSDMB-201ENST00000309481 NESP48681 1621 aa22.13■■□□□ 1.13
GSDMB-201ENST00000309481 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
GSDMB-201ENST00000309481 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
GSDMB-201ENST00000309481 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.12
GSDMB-201ENST00000309481 FANCD2Q9BXW9 1451 aa22.06■■□□□ 1.12
GSDMB-201ENST00000309481 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
GSDMB-201ENST00000309481 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
GSDMB-201ENST00000309481 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
GSDMB-201ENST00000309481 TOP2BQ02880 1626 aa21.92■■□□□ 1.1
GSDMB-201ENST00000309481 CUX1P39880 1505 aa21.91■■□□□ 1.1
GSDMB-201ENST00000309481 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
GSDMB-201ENST00000309481 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
GSDMB-201ENST00000309481 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.08
GSDMB-201ENST00000309481 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
GSDMB-201ENST00000309481 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
GSDMB-201ENST00000309481 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
GSDMB-201ENST00000309481 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
GSDMB-201ENST00000309481 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
GSDMB-201ENST00000309481 EEA1Q15075 1411 aa21.68■■□□□ 1.06
GSDMB-201ENST00000309481 SOGA1O94964 1423 aa21.66■■□□□ 1.06
GSDMB-201ENST00000309481 WDR62O43379 1518 aa21.66■■□□□ 1.06
GSDMB-201ENST00000309481 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
GSDMB-201ENST00000309481 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
GSDMB-201ENST00000309481 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
GSDMB-201ENST00000309481 RUSC2Q8N2Y8 1516 aa21.57■■□□□ 1.04
GSDMB-201ENST00000309481 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
GSDMB-201ENST00000309481 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
GSDMB-201ENST00000309481 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
GSDMB-201ENST00000309481 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
GSDMB-201ENST00000309481 CUX2O14529 1486 aa21.54■■□□□ 1.04
GSDMB-201ENST00000309481 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
GSDMB-201ENST00000309481 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
GSDMB-201ENST00000309481 WDR97A6NE52 1622 aa21.46■■□□□ 1.03
GSDMB-201ENST00000309481 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
GSDMB-201ENST00000309481 IGF1RP08069 1367 aa21.38■■□□□ 1.01
GSDMB-201ENST00000309481 TDRD9Q8NDG6 1382 aaKnown RBP21.38■■□□□ 1.01
GSDMB-201ENST00000309481 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
GSDMB-201ENST00000309481 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
GSDMB-201ENST00000309481 KIF21BO75037 1637 aa21.35■■□□□ 1.01
GSDMB-201ENST00000309481 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
GSDMB-201ENST00000309481 GOLGA3Q08378 1498 aa21.31■■□□□ 1
GSDMB-201ENST00000309481 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
GSDMB-201ENST00000309481 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
GSDMB-201ENST00000309481 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
GSDMB-201ENST00000309481 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
GSDMB-201ENST00000309481 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
GSDMB-201ENST00000309481 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
GSDMB-201ENST00000309481 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
GSDMB-201ENST00000309481 CUL7Q14999 1698 aa21.24■□□□□ 0.99
GSDMB-201ENST00000309481 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
GSDMB-201ENST00000309481 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
GSDMB-201ENST00000309481 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
GSDMB-201ENST00000309481 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
GSDMB-201ENST00000309481 FHAD1B1AJZ9 1412 aa21.15■□□□□ 0.98
GSDMB-201ENST00000309481 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
GSDMB-201ENST00000309481 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
GSDMB-201ENST00000309481 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
GSDMB-201ENST00000309481 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
GSDMB-201ENST00000309481 SYNJ2O15056 1496 aa21.02■□□□□ 0.95
GSDMB-201ENST00000309481 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
GSDMB-201ENST00000309481 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
GSDMB-201ENST00000309481 CLIP1P30622 1438 aa20.95■□□□□ 0.94
GSDMB-201ENST00000309481 CTTNBP2Q8WZ74 1663 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms