RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
NDUFA11-201ENST00000308961 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
NDUFA11-201ENST00000308961 ABCC9O60706 1549 aa34.2■■■■□ 3.06
NDUFA11-201ENST00000308961 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
NDUFA11-201ENST00000308961 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
NDUFA11-201ENST00000308961 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
NDUFA11-201ENST00000308961 NACADO15069 1562 aa33.19■■■□□ 2.9
NDUFA11-201ENST00000308961 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
NDUFA11-201ENST00000308961 RB1CC1Q8TDY2 1594 aa33.06■■■□□ 2.88
NDUFA11-201ENST00000308961 SCRIBQ14160 1630 aa32.5■■■□□ 2.79
NDUFA11-201ENST00000308961 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
NDUFA11-201ENST00000308961 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
NDUFA11-201ENST00000308961 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
NDUFA11-201ENST00000308961 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
NDUFA11-201ENST00000308961 CECR2Q9BXF3 1484 aa31.42■■■□□ 2.62
NDUFA11-201ENST00000308961 EIF4G1Q04637 1599 aaKnown RBP31.18■■■□□ 2.58
NDUFA11-201ENST00000308961 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
NDUFA11-201ENST00000308961 BAZ1AQ9NRL2 1556 aaPredicted RBP31.13■■■□□ 2.57
NDUFA11-201ENST00000308961 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
NDUFA11-201ENST00000308961 RSF1Q96T23 1441 aaPredicted RBP31.01■■■□□ 2.55
NDUFA11-201ENST00000308961 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
NDUFA11-201ENST00000308961 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
NDUFA11-201ENST00000308961 WIZO95785 1651 aa30.82■■■□□ 2.52
NDUFA11-201ENST00000308961 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
NDUFA11-201ENST00000308961 SUPT5HO00267 1087 aaKnown RBP30.8■■■□□ 2.52
NDUFA11-201ENST00000308961 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
NDUFA11-201ENST00000308961 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
NDUFA11-201ENST00000308961 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
NDUFA11-201ENST00000308961 BAZ1BQ9UIG0 1483 aaKnown RBP30.55■■■□□ 2.48
NDUFA11-201ENST00000308961 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
NDUFA11-201ENST00000308961 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
NDUFA11-201ENST00000308961 CCDC88BA6NC98 1476 aa30.18■■■□□ 2.42
NDUFA11-201ENST00000308961 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
NDUFA11-201ENST00000308961 NESP48681 1621 aa29.82■■■□□ 2.36
NDUFA11-201ENST00000308961 CFTRP13569 1480 aa29.78■■■□□ 2.36
NDUFA11-201ENST00000308961 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
NDUFA11-201ENST00000308961 PRDM2Q13029 1718 aa29.5■■■□□ 2.31
NDUFA11-201ENST00000308961 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
NDUFA11-201ENST00000308961 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
NDUFA11-201ENST00000308961 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
NDUFA11-201ENST00000308961 CEP164Q9UPV0 1460 aa29.34■■■□□ 2.29
NDUFA11-201ENST00000308961 ERCC6Q03468 1493 aa29.33■■■□□ 2.29
NDUFA11-201ENST00000308961 ABCC8Q09428 1581 aa29.29■■■□□ 2.28
NDUFA11-201ENST00000308961 URB2Q14146 1524 aaKnown RBP29.18■■■□□ 2.26
NDUFA11-201ENST00000308961 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
NDUFA11-201ENST00000308961 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
NDUFA11-201ENST00000308961 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
NDUFA11-201ENST00000308961 CUX1P39880 1505 aa29.15■■■□□ 2.26
NDUFA11-201ENST00000308961 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
NDUFA11-201ENST00000308961 TOPBP1Q92547 1522 aa29.1■■■□□ 2.25
NDUFA11-201ENST00000308961 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
NDUFA11-201ENST00000308961 DNMBPQ6XZF7 1577 aa29.07■■■□□ 2.24
NDUFA11-201ENST00000308961 WDR62O43379 1518 aa29.04■■■□□ 2.24
NDUFA11-201ENST00000308961 TOP2BQ02880 1626 aa29.01■■■□□ 2.23
NDUFA11-201ENST00000308961 TRIM41Q8WV44 630 aa29■■■□□ 2.23
NDUFA11-201ENST00000308961 BIVM-ERCC5R4GMW8 1640 aa28.99■■■□□ 2.23
NDUFA11-201ENST00000308961 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
NDUFA11-201ENST00000308961 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
NDUFA11-201ENST00000308961 CUX2O14529 1486 aa28.85■■■□□ 2.21
NDUFA11-201ENST00000308961 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
NDUFA11-201ENST00000308961 SOGA1O94964 1423 aa28.8■■■□□ 2.2
NDUFA11-201ENST00000308961 TARBP1Q13395 1621 aaKnown RBP28.71■■■□□ 2.19
NDUFA11-201ENST00000308961 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
NDUFA11-201ENST00000308961 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
NDUFA11-201ENST00000308961 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
NDUFA11-201ENST00000308961 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
NDUFA11-201ENST00000308961 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
NDUFA11-201ENST00000308961 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
NDUFA11-201ENST00000308961 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.167e-6■■□□□ 13.1
NDUFA11-201ENST00000308961 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
NDUFA11-201ENST00000308961 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
NDUFA11-201ENST00000308961 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
NDUFA11-201ENST00000308961 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.14
NDUFA11-201ENST00000308961 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
NDUFA11-201ENST00000308961 IGF1RP08069 1367 aa28.38■■■□□ 2.13
NDUFA11-201ENST00000308961 EEA1Q15075 1411 aa28.35■■■□□ 2.13
NDUFA11-201ENST00000308961 CSRNP3Q8WYN3 585 aa28.34■■■□□ 2.13
NDUFA11-201ENST00000308961 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
NDUFA11-201ENST00000308961 PBRM1Q86U86 1689 aa28.3■■■□□ 2.12
NDUFA11-201ENST00000308961 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
NDUFA11-201ENST00000308961 SNAPC4Q5SXM2 1469 aa28.24■■■□□ 2.11
NDUFA11-201ENST00000308961 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
NDUFA11-201ENST00000308961 MAGI1Q96QZ7 1491 aaPredicted RBP28.16■■■□□ 2.1
NDUFA11-201ENST00000308961 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
NDUFA11-201ENST00000308961 ADAMTS12P58397 1594 aa28.14■■■□□ 2.1
NDUFA11-201ENST00000308961 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
NDUFA11-201ENST00000308961 CUL7Q14999 1698 aa28.12■■■□□ 2.09
NDUFA11-201ENST00000308961 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
NDUFA11-201ENST00000308961 SYNJ2O15056 1496 aa28.07■■■□□ 2.08
NDUFA11-201ENST00000308961 FBLN2P98095 1184 aa28.06■■■□□ 2.08
NDUFA11-201ENST00000308961 RAPGEF2Q9Y4G8 1499 aa28.06■■■□□ 2.08
NDUFA11-201ENST00000308961 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
NDUFA11-201ENST00000308961 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
NDUFA11-201ENST00000308961 KIF21BO75037 1637 aa28.03■■■□□ 2.08
NDUFA11-201ENST00000308961 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
NDUFA11-201ENST00000308961 CHD1O14646 1710 aa27.96■■■□□ 2.07
NDUFA11-201ENST00000308961 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
NDUFA11-201ENST00000308961 UBTFP17480 764 aaKnown RBP27.88■■■□□ 2.05
NDUFA11-201ENST00000308961 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
NDUFA11-201ENST00000308961 NUP160Q12769 1436 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms