RNA–Protein interactions for RNA: ENST00000303910.4

HIST1H2AE-201, Transcript of histone cluster 1 H2A family member e, humanhuman

APPRIS P1 BASIC

Gene HIST1H2AE, Length 509 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AE-201ENST00000303910 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
HIST1H2AE-201ENST00000303910 ABCC9O60706 1549 aa30.26■■■□□ 2.43
HIST1H2AE-201ENST00000303910 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
HIST1H2AE-201ENST00000303910 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
HIST1H2AE-201ENST00000303910 NACADO15069 1562 aa28.51■■■□□ 2.15
HIST1H2AE-201ENST00000303910 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
HIST1H2AE-201ENST00000303910 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.11
HIST1H2AE-201ENST00000303910 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
HIST1H2AE-201ENST00000303910 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
HIST1H2AE-201ENST00000303910 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
HIST1H2AE-201ENST00000303910 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
HIST1H2AE-201ENST00000303910 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
HIST1H2AE-201ENST00000303910 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
HIST1H2AE-201ENST00000303910 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
HIST1H2AE-201ENST00000303910 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
HIST1H2AE-201ENST00000303910 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
HIST1H2AE-201ENST00000303910 CECR2Q9BXF3 1484 aa27.29■■□□□ 1.96
HIST1H2AE-201ENST00000303910 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
HIST1H2AE-201ENST00000303910 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
HIST1H2AE-201ENST00000303910 CUX2O14529 1486 aa26.23■■□□□ 1.79
HIST1H2AE-201ENST00000303910 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
HIST1H2AE-201ENST00000303910 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
HIST1H2AE-201ENST00000303910 SMARCA4P51532 1647 aa26.15■■□□□ 1.78
HIST1H2AE-201ENST00000303910 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
HIST1H2AE-201ENST00000303910 HMGXB3Q12766 1538 aa26.14■■□□□ 1.77
HIST1H2AE-201ENST00000303910 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
HIST1H2AE-201ENST00000303910 BAZ1AQ9NRL2 1556 aaPredicted RBP25.97■■□□□ 1.75
HIST1H2AE-201ENST00000303910 BAZ1BQ9UIG0 1483 aaKnown RBP25.92■■□□□ 1.74
HIST1H2AE-201ENST00000303910 NESP48681 1621 aa25.92■■□□□ 1.74
HIST1H2AE-201ENST00000303910 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
HIST1H2AE-201ENST00000303910 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
HIST1H2AE-201ENST00000303910 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
HIST1H2AE-201ENST00000303910 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
HIST1H2AE-201ENST00000303910 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
HIST1H2AE-201ENST00000303910 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
HIST1H2AE-201ENST00000303910 WIZO95785 1651 aa25.44■■□□□ 1.66
HIST1H2AE-201ENST00000303910 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
HIST1H2AE-201ENST00000303910 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
HIST1H2AE-201ENST00000303910 WDR62O43379 1518 aa25.38■■□□□ 1.65
HIST1H2AE-201ENST00000303910 CEP164Q9UPV0 1460 aa25.27■■□□□ 1.64
HIST1H2AE-201ENST00000303910 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
HIST1H2AE-201ENST00000303910 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
HIST1H2AE-201ENST00000303910 CFTRP13569 1480 aa25.1■■□□□ 1.61
HIST1H2AE-201ENST00000303910 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
HIST1H2AE-201ENST00000303910 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
HIST1H2AE-201ENST00000303910 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
HIST1H2AE-201ENST00000303910 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
HIST1H2AE-201ENST00000303910 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
HIST1H2AE-201ENST00000303910 IFT140Q96RY7 1462 aa24.74■■□□□ 1.55
HIST1H2AE-201ENST00000303910 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
HIST1H2AE-201ENST00000303910 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
HIST1H2AE-201ENST00000303910 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
HIST1H2AE-201ENST00000303910 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
HIST1H2AE-201ENST00000303910 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
HIST1H2AE-201ENST00000303910 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
HIST1H2AE-201ENST00000303910 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
HIST1H2AE-201ENST00000303910 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
HIST1H2AE-201ENST00000303910 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
HIST1H2AE-201ENST00000303910 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
HIST1H2AE-201ENST00000303910 CHD1O14646 1710 aa24.58■■□□□ 1.53
HIST1H2AE-201ENST00000303910 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
HIST1H2AE-201ENST00000303910 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
HIST1H2AE-201ENST00000303910 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
HIST1H2AE-201ENST00000303910 WDR97A6NE52 1622 aa24.33■■□□□ 1.49
HIST1H2AE-201ENST00000303910 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
HIST1H2AE-201ENST00000303910 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
HIST1H2AE-201ENST00000303910 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
HIST1H2AE-201ENST00000303910 FBLN2P98095 1184 aa24.25■■□□□ 1.47
HIST1H2AE-201ENST00000303910 SOGA1O94964 1423 aa24.23■■□□□ 1.47
HIST1H2AE-201ENST00000303910 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
HIST1H2AE-201ENST00000303910 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
HIST1H2AE-201ENST00000303910 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
HIST1H2AE-201ENST00000303910 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
HIST1H2AE-201ENST00000303910 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
HIST1H2AE-201ENST00000303910 CUX1P39880 1505 aa24.17■■□□□ 1.46
HIST1H2AE-201ENST00000303910 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
HIST1H2AE-201ENST00000303910 PBRM1Q86U86 1689 aa24.17■■□□□ 1.46
HIST1H2AE-201ENST00000303910 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
HIST1H2AE-201ENST00000303910 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
HIST1H2AE-201ENST00000303910 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
HIST1H2AE-201ENST00000303910 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
HIST1H2AE-201ENST00000303910 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
HIST1H2AE-201ENST00000303910 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
HIST1H2AE-201ENST00000303910 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
HIST1H2AE-201ENST00000303910 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
HIST1H2AE-201ENST00000303910 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
HIST1H2AE-201ENST00000303910 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
HIST1H2AE-201ENST00000303910 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
HIST1H2AE-201ENST00000303910 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
HIST1H2AE-201ENST00000303910 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
HIST1H2AE-201ENST00000303910 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
HIST1H2AE-201ENST00000303910 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
HIST1H2AE-201ENST00000303910 NUP160Q12769 1436 aa23.72■■□□□ 1.39
HIST1H2AE-201ENST00000303910 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
HIST1H2AE-201ENST00000303910 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
HIST1H2AE-201ENST00000303910 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
HIST1H2AE-201ENST00000303910 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
HIST1H2AE-201ENST00000303910 KIF13AQ9H1H9 1805 aa23.61■■□□□ 1.37
HIST1H2AE-201ENST00000303910 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
HIST1H2AE-201ENST00000303910 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms