RNA–Protein interactions for RNA: ENST00000302708.8

ALKBH3-201, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH3, Length 1,474 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-201ENST00000302708 NISCHQ9Y2I1 1504 aa42.23■■■■■ 4.35
ALKBH3-201ENST00000302708 ABCC9O60706 1549 aa38.48■■■■□ 3.75
ALKBH3-201ENST00000302708 CCDC180Q9P1Z9 1646 aa38.03■■■■□ 3.68
ALKBH3-201ENST00000302708 DNAJC5BQ9UF47 199 aa36.43■■■■□ 3.42
ALKBH3-201ENST00000302708 RB1CC1Q8TDY2 1594 aa36.37■■■■□ 3.41
ALKBH3-201ENST00000302708 NACADO15069 1562 aa36■■■■□ 3.35
ALKBH3-201ENST00000302708 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
ALKBH3-201ENST00000302708 PABPN1Q86U42 306 aaKnown RBP eCLIP35.77■■■■□ 3.32
ALKBH3-201ENST00000302708 UNC13AQ9UPW8 1703 aa35.69■■■■□ 3.3
ALKBH3-201ENST00000302708 BICRAQ9NZM4 1560 aa35.4■■■■□ 3.26
ALKBH3-201ENST00000302708 MYO15BQ96JP2 1530 aa35.33■■■■□ 3.25
ALKBH3-201ENST00000302708 ZCCHC6Q5VYS8 1495 aaKnown RBP34.94■■■■□ 3.18
ALKBH3-201ENST00000302708 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
ALKBH3-201ENST00000302708 SCRIBQ14160 1630 aa34.75■■■■□ 3.15
ALKBH3-201ENST00000302708 CC2D2AQ9P2K1 1620 aa34.72■■■■□ 3.15
ALKBH3-201ENST00000302708 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
ALKBH3-201ENST00000302708 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
ALKBH3-201ENST00000302708 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
ALKBH3-201ENST00000302708 DNAJC5Q9H3Z4 198 aa33.59■■■□□ 2.97
ALKBH3-201ENST00000302708 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
ALKBH3-201ENST00000302708 CUX2O14529 1486 aa33.18■■■□□ 2.9
ALKBH3-201ENST00000302708 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
ALKBH3-201ENST00000302708 ATAD2BQ9ULI0 1458 aa33.15■■■□□ 2.9
ALKBH3-201ENST00000302708 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
ALKBH3-201ENST00000302708 SMARCA2P51531 1590 aa32.99■■■□□ 2.87
ALKBH3-201ENST00000302708 HMGXB3Q12766 1538 aa32.98■■■□□ 2.87
ALKBH3-201ENST00000302708 NESP48681 1621 aa32.98■■■□□ 2.87
ALKBH3-201ENST00000302708 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
ALKBH3-201ENST00000302708 BAZ1AQ9NRL2 1556 aaPredicted RBP32.78■■■□□ 2.84
ALKBH3-201ENST00000302708 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
ALKBH3-201ENST00000302708 PEG3Q9GZU2 1588 aa32.67■■■□□ 2.82
ALKBH3-201ENST00000302708 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
ALKBH3-201ENST00000302708 LAMC3Q9Y6N6 1575 aa32.57■■■□□ 2.8
ALKBH3-201ENST00000302708 KIF21AQ7Z4S6 1674 aa32.55■■■□□ 2.8
ALKBH3-201ENST00000302708 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
ALKBH3-201ENST00000302708 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
ALKBH3-201ENST00000302708 WIZO95785 1651 aa32.23■■■□□ 2.75
ALKBH3-201ENST00000302708 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
ALKBH3-201ENST00000302708 WDR62O43379 1518 aa32.1■■■□□ 2.73
ALKBH3-201ENST00000302708 TRIM41Q8WV44 630 aa32.07■■■□□ 2.72
ALKBH3-201ENST00000302708 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
ALKBH3-201ENST00000302708 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
ALKBH3-201ENST00000302708 CFTRP13569 1480 aa31.8■■■□□ 2.68
ALKBH3-201ENST00000302708 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
ALKBH3-201ENST00000302708 TOP2AP11388 1531 aaKnown RBP31.71■■■□□ 2.67
ALKBH3-201ENST00000302708 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
ALKBH3-201ENST00000302708 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
ALKBH3-201ENST00000302708 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
ALKBH3-201ENST00000302708 ZNF608Q9ULD9 1512 aaPredicted RBP31.4■■■□□ 2.62
ALKBH3-201ENST00000302708 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
ALKBH3-201ENST00000302708 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
ALKBH3-201ENST00000302708 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
ALKBH3-201ENST00000302708 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
ALKBH3-201ENST00000302708 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
ALKBH3-201ENST00000302708 TOPBP1Q92547 1522 aa31.28■■■□□ 2.6
ALKBH3-201ENST00000302708 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.58
ALKBH3-201ENST00000302708 ARHGEF11O15085 1522 aa31.18■■■□□ 2.58
ALKBH3-201ENST00000302708 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
ALKBH3-201ENST00000302708 CHD1O14646 1710 aa31.07■■■□□ 2.56
ALKBH3-201ENST00000302708 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
ALKBH3-201ENST00000302708 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.562e-6■■■■■ 36
ALKBH3-201ENST00000302708 TARBP1Q13395 1621 aaKnown RBP31.04■■■□□ 2.56
ALKBH3-201ENST00000302708 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
ALKBH3-201ENST00000302708 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
ALKBH3-201ENST00000302708 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.54
ALKBH3-201ENST00000302708 FBLN2P98095 1184 aa30.89■■■□□ 2.54
ALKBH3-201ENST00000302708 RAD54L2Q9Y4B4 1467 aa30.88■■■□□ 2.53
ALKBH3-201ENST00000302708 ARAP1Q96P48 1450 aa30.87■■■□□ 2.53
ALKBH3-201ENST00000302708 TDRD9Q8NDG6 1382 aaKnown RBP30.8■■■□□ 2.52
ALKBH3-201ENST00000302708 SOGA1O94964 1423 aa30.76■■■□□ 2.51
ALKBH3-201ENST00000302708 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
ALKBH3-201ENST00000302708 SNAPC4Q5SXM2 1469 aa30.71■■■□□ 2.51
ALKBH3-201ENST00000302708 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
ALKBH3-201ENST00000302708 CUX1P39880 1505 aa30.64■■■□□ 2.5
ALKBH3-201ENST00000302708 CLASP1Q7Z460 1538 aa30.64■■■□□ 2.49
ALKBH3-201ENST00000302708 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
ALKBH3-201ENST00000302708 CHMP7Q8WUX9 453 aaPredicted RBP30.56■■■□□ 2.48
ALKBH3-201ENST00000302708 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
ALKBH3-201ENST00000302708 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
ALKBH3-201ENST00000302708 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
ALKBH3-201ENST00000302708 PBRM1Q86U86 1689 aa30.47■■■□□ 2.47
ALKBH3-201ENST00000302708 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
ALKBH3-201ENST00000302708 GAPVD1Q14C86 1478 aa30.38■■■□□ 2.45
ALKBH3-201ENST00000302708 ABCA5Q8WWZ7 1642 aa30.32■■■□□ 2.44
ALKBH3-201ENST00000302708 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
ALKBH3-201ENST00000302708 ERCC6L2Q5T890 1561 aa30.22■■■□□ 2.43
ALKBH3-201ENST00000302708 GRIN2AQ12879 1464 aa30.16■■■□□ 2.42
ALKBH3-201ENST00000302708 ADAMTS12P58397 1594 aa30.12■■■□□ 2.41
ALKBH3-201ENST00000302708 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
ALKBH3-201ENST00000302708 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
ALKBH3-201ENST00000302708 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
ALKBH3-201ENST00000302708 NUP160Q12769 1436 aa30.06■■■□□ 2.4
ALKBH3-201ENST00000302708 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
ALKBH3-201ENST00000302708 TOP2BQ02880 1626 aa30.01■■■□□ 2.39
ALKBH3-201ENST00000302708 SHROOM2Q13796 1616 aa29.98■■■□□ 2.39
ALKBH3-201ENST00000302708 FHAD1B1AJZ9 1412 aa29.95■■■□□ 2.39
ALKBH3-201ENST00000302708 CHIC1Q5VXU3 224 aa29.94■■■□□ 2.38
ALKBH3-201ENST00000302708 ERICH3Q5RHP9 1530 aa29.88■■■□□ 2.37
ALKBH3-201ENST00000302708 KIF13AQ9H1H9 1805 aa29.84■■■□□ 2.37
ALKBH3-201ENST00000302708 PRG4Q92954 1404 aaPredicted RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms