RNA–Protein interactions for RNA: ENST00000301634.11

TK1-201, Transcript of thymidine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TK1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK1-201ENST00000301634 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
TK1-201ENST00000301634 CCDC180Q9P1Z9 1646 aa31.66■■■□□ 2.66
TK1-201ENST00000301634 ABCC9O60706 1549 aa31.34■■■□□ 2.61
TK1-201ENST00000301634 ZCCHC6Q5VYS8 1495 aaKnown RBP29.94■■■□□ 2.38
TK1-201ENST00000301634 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
TK1-201ENST00000301634 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
TK1-201ENST00000301634 NACADO15069 1562 aa29.81■■■□□ 2.36
TK1-201ENST00000301634 MYO15BQ96JP2 1530 aa29.7■■■□□ 2.34
TK1-201ENST00000301634 DCAF1Q9Y4B6 1507 aa29.68■■■□□ 2.34
TK1-201ENST00000301634 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
TK1-201ENST00000301634 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
TK1-201ENST00000301634 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
TK1-201ENST00000301634 BICRAQ9NZM4 1560 aa29.08■■■□□ 2.25
TK1-201ENST00000301634 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
TK1-201ENST00000301634 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.18
TK1-201ENST00000301634 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
TK1-201ENST00000301634 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
TK1-201ENST00000301634 CECR2Q9BXF3 1484 aa28.17■■■□□ 2.1
TK1-201ENST00000301634 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
TK1-201ENST00000301634 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
TK1-201ENST00000301634 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
TK1-201ENST00000301634 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
TK1-201ENST00000301634 NCAPD3P42695 1498 aa27.55■■■□□ 2
TK1-201ENST00000301634 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
TK1-201ENST00000301634 PEG3Q9GZU2 1588 aa27.46■■□□□ 1.99
TK1-201ENST00000301634 RSF1Q96T23 1441 aaPredicted RBP27.46■■□□□ 1.99
TK1-201ENST00000301634 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
TK1-201ENST00000301634 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
TK1-201ENST00000301634 WIZO95785 1651 aa27.31■■□□□ 1.96
TK1-201ENST00000301634 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
TK1-201ENST00000301634 NESP48681 1621 aa27.03■■□□□ 1.92
TK1-201ENST00000301634 ERCC6Q03468 1493 aa27■■□□□ 1.91
TK1-201ENST00000301634 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
TK1-201ENST00000301634 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
TK1-201ENST00000301634 CUX2O14529 1486 aa26.81■■□□□ 1.88
TK1-201ENST00000301634 CCDC88BA6NC98 1476 aa26.78■■□□□ 1.88
TK1-201ENST00000301634 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
TK1-201ENST00000301634 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
TK1-201ENST00000301634 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
TK1-201ENST00000301634 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
TK1-201ENST00000301634 CFTRP13569 1480 aa26.61■■□□□ 1.85
TK1-201ENST00000301634 DNAJC5Q9H3Z4 198 aa26.48■■□□□ 1.83
TK1-201ENST00000301634 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
TK1-201ENST00000301634 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
TK1-201ENST00000301634 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
TK1-201ENST00000301634 WDR62O43379 1518 aa26.34■■□□□ 1.81
TK1-201ENST00000301634 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
TK1-201ENST00000301634 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
TK1-201ENST00000301634 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
TK1-201ENST00000301634 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
TK1-201ENST00000301634 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
TK1-201ENST00000301634 CUX1P39880 1505 aa25.91■■□□□ 1.74
TK1-201ENST00000301634 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.734e-6■□□□□ 10.4
TK1-201ENST00000301634 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
TK1-201ENST00000301634 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
TK1-201ENST00000301634 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
TK1-201ENST00000301634 FGD5Q6ZNL6 1462 aa25.78■■□□□ 1.72
TK1-201ENST00000301634 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
TK1-201ENST00000301634 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
TK1-201ENST00000301634 OSCARQ8IYS5 282 aa25.73■■□□□ 1.71
TK1-201ENST00000301634 SOGA1O94964 1423 aa25.72■■□□□ 1.71
TK1-201ENST00000301634 RAD54L2Q9Y4B4 1467 aa25.7■■□□□ 1.71
TK1-201ENST00000301634 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.71
TK1-201ENST00000301634 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
TK1-201ENST00000301634 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.73e-7■■■■□ 22.8
TK1-201ENST00000301634 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
TK1-201ENST00000301634 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
TK1-201ENST00000301634 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
TK1-201ENST00000301634 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
TK1-201ENST00000301634 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
TK1-201ENST00000301634 FBLN2P98095 1184 aa25.44■■□□□ 1.66
TK1-201ENST00000301634 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
TK1-201ENST00000301634 CHD1O14646 1710 aa25.4■■□□□ 1.66
TK1-201ENST00000301634 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
TK1-201ENST00000301634 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
TK1-201ENST00000301634 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
TK1-201ENST00000301634 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
TK1-201ENST00000301634 KIF27Q86VH2 1401 aa25.3■■□□□ 1.64
TK1-201ENST00000301634 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
TK1-201ENST00000301634 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
TK1-201ENST00000301634 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
TK1-201ENST00000301634 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
TK1-201ENST00000301634 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
TK1-201ENST00000301634 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
TK1-201ENST00000301634 PBRM1Q86U86 1689 aa25.24■■□□□ 1.63
TK1-201ENST00000301634 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
TK1-201ENST00000301634 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
TK1-201ENST00000301634 IGF1RP08069 1367 aa25.2■■□□□ 1.62
TK1-201ENST00000301634 RUSC2Q8N2Y8 1516 aa25.18■■□□□ 1.62
TK1-201ENST00000301634 FHAD1B1AJZ9 1412 aa25.14■■□□□ 1.61
TK1-201ENST00000301634 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
TK1-201ENST00000301634 CYB5RLQ6IPT4 315 aa25.12■■□□□ 1.61
TK1-201ENST00000301634 CLASP1Q7Z460 1538 aa25.12■■□□□ 1.61
TK1-201ENST00000301634 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
TK1-201ENST00000301634 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
TK1-201ENST00000301634 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
TK1-201ENST00000301634 EEA1Q15075 1411 aa25.01■■□□□ 1.59
TK1-201ENST00000301634 CUL7Q14999 1698 aa25■■□□□ 1.59
TK1-201ENST00000301634 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
TK1-201ENST00000301634 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms