RNA–Protein interactions for RNA: ENST00000298786.4

FAM35A-202, Transcript of Protein FAM35A, humanhuman

TSL 5 BASIC

Gene FAM35A, Length 3,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM35A-202ENST00000298786 NISCHQ9Y2I1 1504 aa12.71□□□□□ -0.37
FAM35A-202ENST00000298786 CCDC180Q9P1Z9 1646 aa12.24□□□□□ -0.45
FAM35A-202ENST00000298786 ABCC9O60706 1549 aa12.02□□□□□ -0.49
FAM35A-202ENST00000298786 DNAJC5BQ9UF47 199 aa11.94□□□□□ -0.5
FAM35A-202ENST00000298786 DNAJC5Q9H3Z4 198 aa11.74□□□□□ -0.53
FAM35A-202ENST00000298786 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
FAM35A-202ENST00000298786 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
FAM35A-202ENST00000298786 SHROOM4Q9ULL8 1493 aa11.61□□□□□ -0.55
FAM35A-202ENST00000298786 NACADO15069 1562 aa11.51□□□□□ -0.57
FAM35A-202ENST00000298786 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
FAM35A-202ENST00000298786 MYO15BQ96JP2 1530 aa11.44□□□□□ -0.58
FAM35A-202ENST00000298786 CUX2O14529 1486 aa11.28□□□□□ -0.6
FAM35A-202ENST00000298786 CC2D2AQ9P2K1 1620 aa11.23□□□□□ -0.61
FAM35A-202ENST00000298786 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
FAM35A-202ENST00000298786 EIF4G1Q04637 1599 aaKnown RBP11.06□□□□□ -0.64
FAM35A-202ENST00000298786 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
FAM35A-202ENST00000298786 THOC2Q8NI27 1593 aaKnown RBP10.79□□□□□ -0.68
FAM35A-202ENST00000298786 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
FAM35A-202ENST00000298786 HMGXB3Q12766 1538 aa10.54□□□□□ -0.72
FAM35A-202ENST00000298786 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
FAM35A-202ENST00000298786 LAMC3Q9Y6N6 1575 aa10.5□□□□□ -0.73
FAM35A-202ENST00000298786 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
FAM35A-202ENST00000298786 ZCCHC6Q5VYS8 1495 aaKnown RBP10.46□□□□□ -0.73
FAM35A-202ENST00000298786 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
FAM35A-202ENST00000298786 WDR62O43379 1518 aa10.42□□□□□ -0.74
FAM35A-202ENST00000298786 RIMBP3CA6NJZ7 1639 aa10.42□□□□□ -0.74
FAM35A-202ENST00000298786 RIMBP3BA6NNM3 1639 aa10.42□□□□□ -0.74
FAM35A-202ENST00000298786 RIMBP3Q9UFD9 1639 aa10.42□□□□□ -0.74
FAM35A-202ENST00000298786 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
FAM35A-202ENST00000298786 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.75
FAM35A-202ENST00000298786 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
FAM35A-202ENST00000298786 SCRIBQ14160 1630 aa10.37□□□□□ -0.75
FAM35A-202ENST00000298786 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
FAM35A-202ENST00000298786 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
FAM35A-202ENST00000298786 MRC2Q9UBG0 1479 aa10.21□□□□□ -0.78
FAM35A-202ENST00000298786 ARHGEF11O15085 1522 aa10.19□□□□□ -0.78
FAM35A-202ENST00000298786 NESP48681 1621 aa10.18□□□□□ -0.78
FAM35A-202ENST00000298786 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
FAM35A-202ENST00000298786 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
FAM35A-202ENST00000298786 PRDM2Q13029 1718 aa10.14□□□□□ -0.79
FAM35A-202ENST00000298786 RSF1Q96T23 1441 aaPredicted RBP10.08□□□□□ -0.8
FAM35A-202ENST00000298786 ARAP1Q96P48 1450 aa10.04□□□□□ -0.8
FAM35A-202ENST00000298786 OSCARQ8IYS5 282 aa10.02□□□□□ -0.8
FAM35A-202ENST00000298786 WDR97A6NE52 1622 aa10.02□□□□□ -0.8
FAM35A-202ENST00000298786 CLASP1Q7Z460 1538 aa9.98□□□□□ -0.81
FAM35A-202ENST00000298786 CHD1O14646 1710 aa9.96□□□□□ -0.81
FAM35A-202ENST00000298786 ERCC6L2Q5T890 1561 aa9.96□□□□□ -0.81
FAM35A-202ENST00000298786 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
FAM35A-202ENST00000298786 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
FAM35A-202ENST00000298786 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
FAM35A-202ENST00000298786 CEP164Q9UPV0 1460 aa9.9□□□□□ -0.83
FAM35A-202ENST00000298786 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
FAM35A-202ENST00000298786 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
FAM35A-202ENST00000298786 EIF4G3O43432 1585 aaKnown RBP9.85□□□□□ -0.83
FAM35A-202ENST00000298786 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
FAM35A-202ENST00000298786 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
FAM35A-202ENST00000298786 TARBP1Q13395 1621 aaKnown RBP9.81□□□□□ -0.84
FAM35A-202ENST00000298786 CFTRP13569 1480 aa9.81□□□□□ -0.84
FAM35A-202ENST00000298786 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
FAM35A-202ENST00000298786 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
FAM35A-202ENST00000298786 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
FAM35A-202ENST00000298786 SHROOM2Q13796 1616 aa9.72□□□□□ -0.85
FAM35A-202ENST00000298786 SYNJ1O43426 1573 aa9.71□□□□□ -0.86
FAM35A-202ENST00000298786 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
FAM35A-202ENST00000298786 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
FAM35A-202ENST00000298786 MAPKBP1O60336 1514 aa9.64□□□□□ -0.87
FAM35A-202ENST00000298786 HECW2Q9P2P5 1572 aa9.62□□□□□ -0.87
FAM35A-202ENST00000298786 MROH2BQ7Z745 1585 aa9.61□□□□□ -0.87
FAM35A-202ENST00000298786 MAGI1Q96QZ7 1491 aaPredicted RBP9.6□□□□□ -0.87
FAM35A-202ENST00000298786 TOPBP1Q92547 1522 aa9.6□□□□□ -0.87
FAM35A-202ENST00000298786 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
FAM35A-202ENST00000298786 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
FAM35A-202ENST00000298786 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
FAM35A-202ENST00000298786 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
FAM35A-202ENST00000298786 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
FAM35A-202ENST00000298786 CYB5RLQ6IPT4 315 aa9.53□□□□□ -0.88
FAM35A-202ENST00000298786 KDM6BO15054 1643 aa9.53□□□□□ -0.88
FAM35A-202ENST00000298786 ABCC10Q5T3U5 1492 aa9.52□□□□□ -0.89
FAM35A-202ENST00000298786 FBXO41Q8TF61 875 aa9.52□□□□□ -0.89
FAM35A-202ENST00000298786 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
FAM35A-202ENST00000298786 GLI2P10070 1586 aa9.51□□□□□ -0.89
FAM35A-202ENST00000298786 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
FAM35A-202ENST00000298786 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
FAM35A-202ENST00000298786 SYNJ2O15056 1496 aa9.48□□□□□ -0.89
FAM35A-202ENST00000298786 WIZO95785 1651 aa9.47□□□□□ -0.89
FAM35A-202ENST00000298786 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
FAM35A-202ENST00000298786 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
FAM35A-202ENST00000298786 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
FAM35A-202ENST00000298786 SOCS7O14512 581 aa9.42□□□□□ -0.9
FAM35A-202ENST00000298786 ADGRL1O94910 1474 aa9.42□□□□□ -0.9
FAM35A-202ENST00000298786 NUP160Q12769 1436 aa9.41□□□□□ -0.9
FAM35A-202ENST00000298786 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.91
FAM35A-202ENST00000298786 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.91
FAM35A-202ENST00000298786 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
FAM35A-202ENST00000298786 GRIN2BQ13224 1484 aa9.38□□□□□ -0.91
FAM35A-202ENST00000298786 MAP3K4Q9Y6R4 1608 aa9.37□□□□□ -0.91
FAM35A-202ENST00000298786 ADCY10Q96PN6 1610 aa9.35□□□□□ -0.91
FAM35A-202ENST00000298786 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.919e-10■■■■□ 21
FAM35A-202ENST00000298786 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
FAM35A-202ENST00000298786 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms