RNA–Protein interactions for RNA: ENST00000298784.5

FAM35A-201, Transcript of Protein FAM35A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM35A, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM35A-201ENST00000298784 NISCHQ9Y2I1 1504 aa15.02■□□□□ -0
FAM35A-201ENST00000298784 ABCC9O60706 1549 aa14.5□□□□□ -0.09
FAM35A-201ENST00000298784 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
FAM35A-201ENST00000298784 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
FAM35A-201ENST00000298784 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
FAM35A-201ENST00000298784 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
FAM35A-201ENST00000298784 NACADO15069 1562 aa13.5□□□□□ -0.25
FAM35A-201ENST00000298784 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
FAM35A-201ENST00000298784 CECR2Q9BXF3 1484 aa13.3□□□□□ -0.28
FAM35A-201ENST00000298784 CUX2O14529 1486 aa13.24□□□□□ -0.29
FAM35A-201ENST00000298784 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
FAM35A-201ENST00000298784 UNC13AQ9UPW8 1703 aa13.2□□□□□ -0.3
FAM35A-201ENST00000298784 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
FAM35A-201ENST00000298784 CC2D2AQ9P2K1 1620 aa13.19□□□□□ -0.3
FAM35A-201ENST00000298784 MYO15BQ96JP2 1530 aa13.17□□□□□ -0.3
FAM35A-201ENST00000298784 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
FAM35A-201ENST00000298784 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
FAM35A-201ENST00000298784 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
FAM35A-201ENST00000298784 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
FAM35A-201ENST00000298784 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
FAM35A-201ENST00000298784 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
FAM35A-201ENST00000298784 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
FAM35A-201ENST00000298784 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
FAM35A-201ENST00000298784 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
FAM35A-201ENST00000298784 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
FAM35A-201ENST00000298784 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
FAM35A-201ENST00000298784 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
FAM35A-201ENST00000298784 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
FAM35A-201ENST00000298784 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
FAM35A-201ENST00000298784 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
FAM35A-201ENST00000298784 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
FAM35A-201ENST00000298784 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
FAM35A-201ENST00000298784 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
FAM35A-201ENST00000298784 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
FAM35A-201ENST00000298784 WDR62O43379 1518 aa12.15□□□□□ -0.46
FAM35A-201ENST00000298784 NESP48681 1621 aa12.14□□□□□ -0.47
FAM35A-201ENST00000298784 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
FAM35A-201ENST00000298784 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
FAM35A-201ENST00000298784 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
FAM35A-201ENST00000298784 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
FAM35A-201ENST00000298784 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.48
FAM35A-201ENST00000298784 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
FAM35A-201ENST00000298784 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
FAM35A-201ENST00000298784 PEG3Q9GZU2 1588 aa11.95□□□□□ -0.5
FAM35A-201ENST00000298784 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
FAM35A-201ENST00000298784 SMARCA4P51532 1647 aa11.91□□□□□ -0.5
FAM35A-201ENST00000298784 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
FAM35A-201ENST00000298784 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
FAM35A-201ENST00000298784 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
FAM35A-201ENST00000298784 CYB5RLQ6IPT4 315 aa11.85□□□□□ -0.51
FAM35A-201ENST00000298784 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
FAM35A-201ENST00000298784 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
FAM35A-201ENST00000298784 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
FAM35A-201ENST00000298784 URB2Q14146 1524 aaKnown RBP11.62□□□□□ -0.55
FAM35A-201ENST00000298784 CHD1O14646 1710 aa11.61□□□□□ -0.55
FAM35A-201ENST00000298784 CFTRP13569 1480 aa11.6□□□□□ -0.55
FAM35A-201ENST00000298784 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
FAM35A-201ENST00000298784 CLASP1Q7Z460 1538 aa11.58□□□□□ -0.56
FAM35A-201ENST00000298784 FBXO41Q8TF61 875 aa11.58□□□□□ -0.56
FAM35A-201ENST00000298784 WDR97A6NE52 1622 aa11.56□□□□□ -0.56
FAM35A-201ENST00000298784 EIF4G3O43432 1585 aaKnown RBP11.56□□□□□ -0.56
FAM35A-201ENST00000298784 SYNJ1O43426 1573 aa11.55□□□□□ -0.56
FAM35A-201ENST00000298784 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
FAM35A-201ENST00000298784 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
FAM35A-201ENST00000298784 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
FAM35A-201ENST00000298784 LMTK3Q96Q04 1460 aa11.45□□□□□ -0.58
FAM35A-201ENST00000298784 SOCS7O14512 581 aa11.45□□□□□ -0.58
FAM35A-201ENST00000298784 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
FAM35A-201ENST00000298784 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
FAM35A-201ENST00000298784 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
FAM35A-201ENST00000298784 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
FAM35A-201ENST00000298784 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
FAM35A-201ENST00000298784 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
FAM35A-201ENST00000298784 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
FAM35A-201ENST00000298784 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
FAM35A-201ENST00000298784 KDM6BO15054 1643 aa11.35□□□□□ -0.59
FAM35A-201ENST00000298784 FBLN2P98095 1184 aa11.32□□□□□ -0.6
FAM35A-201ENST00000298784 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
FAM35A-201ENST00000298784 AQRO60306 1485 aaKnown RBP eCLIP11.3□□□□□ -0.69e-10■■■■□ 21
FAM35A-201ENST00000298784 ABCC10Q5T3U5 1492 aa11.3□□□□□ -0.6
FAM35A-201ENST00000298784 SNAPC4Q5SXM2 1469 aa11.28□□□□□ -0.6
FAM35A-201ENST00000298784 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
FAM35A-201ENST00000298784 MAPKBP1O60336 1514 aa11.27□□□□□ -0.6
FAM35A-201ENST00000298784 ADGRL1O94910 1474 aa11.27□□□□□ -0.61
FAM35A-201ENST00000298784 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
FAM35A-201ENST00000298784 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
FAM35A-201ENST00000298784 TOP2AP11388 1531 aaKnown RBP11.23□□□□□ -0.61
FAM35A-201ENST00000298784 DIP2BQ9P265 1576 aa11.21□□□□□ -0.61
FAM35A-201ENST00000298784 WIZO95785 1651 aa11.2□□□□□ -0.62
FAM35A-201ENST00000298784 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
FAM35A-201ENST00000298784 SHROOM2Q13796 1616 aa11.18□□□□□ -0.62
FAM35A-201ENST00000298784 FAM69CQ0P6D2 419 aa11.16□□□□□ -0.62
FAM35A-201ENST00000298784 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
FAM35A-201ENST00000298784 SOGA1O94964 1423 aa11.15□□□□□ -0.62
FAM35A-201ENST00000298784 CEP170Q5SW79 1584 aa11.15□□□□□ -0.62
FAM35A-201ENST00000298784 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
FAM35A-201ENST00000298784 NUP160Q12769 1436 aa11.1□□□□□ -0.63
FAM35A-201ENST00000298784 SPATA31D1Q6ZQQ2 1576 aa11.09□□□□□ -0.63
FAM35A-201ENST00000298784 PBRM1Q86U86 1689 aa11.09□□□□□ -0.63
FAM35A-201ENST00000298784 TDRD9Q8NDG6 1382 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms