RNA–Protein interactions for RNA: ENST00000297512.12

ASIC3-201, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 1 (best) BASIC

Gene ASIC3, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-201ENST00000297512 NISCHQ9Y2I1 1504 aa41.05■■■■■ 4.16
ASIC3-201ENST00000297512 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
ASIC3-201ENST00000297512 ABCC9O60706 1549 aa34.66■■■■□ 3.14
ASIC3-201ENST00000297512 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
ASIC3-201ENST00000297512 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
ASIC3-201ENST00000297512 DCAF1Q9Y4B6 1507 aa33.88■■■■□ 3.01
ASIC3-201ENST00000297512 NACADO15069 1562 aa33.67■■■□□ 2.98
ASIC3-201ENST00000297512 MYO15BQ96JP2 1530 aa33.67■■■□□ 2.98
ASIC3-201ENST00000297512 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
ASIC3-201ENST00000297512 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
ASIC3-201ENST00000297512 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
ASIC3-201ENST00000297512 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
ASIC3-201ENST00000297512 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
ASIC3-201ENST00000297512 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.81
ASIC3-201ENST00000297512 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
ASIC3-201ENST00000297512 MROH2BQ7Z745 1585 aa31.72■■■□□ 2.67
ASIC3-201ENST00000297512 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
ASIC3-201ENST00000297512 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
ASIC3-201ENST00000297512 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
ASIC3-201ENST00000297512 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
ASIC3-201ENST00000297512 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
ASIC3-201ENST00000297512 WIZO95785 1651 aa31.45■■■□□ 2.63
ASIC3-201ENST00000297512 CC2D2AQ9P2K1 1620 aa31.33■■■□□ 2.61
ASIC3-201ENST00000297512 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
ASIC3-201ENST00000297512 PEG3Q9GZU2 1588 aa31.28■■■□□ 2.6
ASIC3-201ENST00000297512 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
ASIC3-201ENST00000297512 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
ASIC3-201ENST00000297512 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
ASIC3-201ENST00000297512 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
ASIC3-201ENST00000297512 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
ASIC3-201ENST00000297512 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
ASIC3-201ENST00000297512 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
ASIC3-201ENST00000297512 NESP48681 1621 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 CFTRP13569 1480 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
ASIC3-201ENST00000297512 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
ASIC3-201ENST00000297512 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
ASIC3-201ENST00000297512 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
ASIC3-201ENST00000297512 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
ASIC3-201ENST00000297512 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
ASIC3-201ENST00000297512 KIF21AQ7Z4S6 1674 aa29.89■■■□□ 2.37
ASIC3-201ENST00000297512 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
ASIC3-201ENST00000297512 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
ASIC3-201ENST00000297512 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
ASIC3-201ENST00000297512 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
ASIC3-201ENST00000297512 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
ASIC3-201ENST00000297512 CUX1P39880 1505 aa29.7■■■□□ 2.34
ASIC3-201ENST00000297512 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
ASIC3-201ENST00000297512 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
ASIC3-201ENST00000297512 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
ASIC3-201ENST00000297512 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
ASIC3-201ENST00000297512 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
ASIC3-201ENST00000297512 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
ASIC3-201ENST00000297512 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
ASIC3-201ENST00000297512 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
ASIC3-201ENST00000297512 WDR62O43379 1518 aa29.46■■■□□ 2.31
ASIC3-201ENST00000297512 POLA1P09884 1462 aaPredicted RBP29.4■■■□□ 2.3
ASIC3-201ENST00000297512 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
ASIC3-201ENST00000297512 SOGA1O94964 1423 aa29.27■■■□□ 2.28
ASIC3-201ENST00000297512 CUX2O14529 1486 aa29.26■■■□□ 2.27
ASIC3-201ENST00000297512 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
ASIC3-201ENST00000297512 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
ASIC3-201ENST00000297512 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
ASIC3-201ENST00000297512 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
ASIC3-201ENST00000297512 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
ASIC3-201ENST00000297512 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
ASIC3-201ENST00000297512 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
ASIC3-201ENST00000297512 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
ASIC3-201ENST00000297512 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
ASIC3-201ENST00000297512 EEA1Q15075 1411 aa28.99■■■□□ 2.23
ASIC3-201ENST00000297512 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
ASIC3-201ENST00000297512 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.231e-35■■■■■ 39.3
ASIC3-201ENST00000297512 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
ASIC3-201ENST00000297512 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
ASIC3-201ENST00000297512 CSRNP3Q8WYN3 585 aa28.93■■■□□ 2.22
ASIC3-201ENST00000297512 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.22
ASIC3-201ENST00000297512 IGF1RP08069 1367 aa28.87■■■□□ 2.21
ASIC3-201ENST00000297512 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
ASIC3-201ENST00000297512 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
ASIC3-201ENST00000297512 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
ASIC3-201ENST00000297512 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
ASIC3-201ENST00000297512 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
ASIC3-201ENST00000297512 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
ASIC3-201ENST00000297512 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
ASIC3-201ENST00000297512 KIF21BO75037 1637 aa28.71■■■□□ 2.19
ASIC3-201ENST00000297512 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
ASIC3-201ENST00000297512 CUL7Q14999 1698 aa28.7■■■□□ 2.18
ASIC3-201ENST00000297512 ADAMTS12P58397 1594 aa28.65■■■□□ 2.18
ASIC3-201ENST00000297512 GOLGA3Q08378 1498 aa28.63■■■□□ 2.17
ASIC3-201ENST00000297512 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
ASIC3-201ENST00000297512 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
ASIC3-201ENST00000297512 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
ASIC3-201ENST00000297512 FBLN2P98095 1184 aa28.52■■■□□ 2.16
ASIC3-201ENST00000297512 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
ASIC3-201ENST00000297512 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
ASIC3-201ENST00000297512 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
ASIC3-201ENST00000297512 CHD1O14646 1710 aa28.42■■■□□ 2.14
ASIC3-201ENST00000297512 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
ASIC3-201ENST00000297512 RANGAP1P46060 587 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms