RNA–Protein interactions for RNA: ENST00000296871.3

CSF2-201, Transcript of colony stimulating factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF2, Length 787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2-201ENST00000296871 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
CSF2-201ENST00000296871 AEBP2Q6ZN18 517 aaPredicted RBP37.81■■■■□ 3.64
CSF2-201ENST00000296871 CHIC1Q5VXU3 224 aa35.88■■■■□ 3.33
CSF2-201ENST00000296871 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3.01
CSF2-201ENST00000296871 ABCC9O60706 1549 aa33.64■■■□□ 2.98
CSF2-201ENST00000296871 SENP3Q9H4L4 574 aaPredicted RBP32.4■■■□□ 2.78
CSF2-201ENST00000296871 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
CSF2-201ENST00000296871 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
CSF2-201ENST00000296871 NACADO15069 1562 aa31.92■■■□□ 2.7
CSF2-201ENST00000296871 PHF23Q9BUL5 403 aaPredicted RBP31.91■■■□□ 2.7
CSF2-201ENST00000296871 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
CSF2-201ENST00000296871 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
CSF2-201ENST00000296871 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.62
CSF2-201ENST00000296871 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
CSF2-201ENST00000296871 DNAJC5BQ9UF47 199 aa31.24■■■□□ 2.59
CSF2-201ENST00000296871 DCAF1Q9Y4B6 1507 aa31.23■■■□□ 2.59
CSF2-201ENST00000296871 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
CSF2-201ENST00000296871 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
CSF2-201ENST00000296871 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
CSF2-201ENST00000296871 EIF4G1Q04637 1599 aaKnown RBP30.36■■■□□ 2.45
CSF2-201ENST00000296871 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
CSF2-201ENST00000296871 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
CSF2-201ENST00000296871 FOXD1Q16676 465 aa30.13■■■□□ 2.41
CSF2-201ENST00000296871 SMARCA4P51532 1647 aa29.48■■■□□ 2.31
CSF2-201ENST00000296871 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
CSF2-201ENST00000296871 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
CSF2-201ENST00000296871 SMARCA2P51531 1590 aa29.38■■■□□ 2.29
CSF2-201ENST00000296871 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
CSF2-201ENST00000296871 HMGXB3Q12766 1538 aa29.27■■■□□ 2.28
CSF2-201ENST00000296871 BAZ1BQ9UIG0 1483 aaKnown RBP29.21■■■□□ 2.27
CSF2-201ENST00000296871 MROH2BQ7Z745 1585 aa29.18■■■□□ 2.26
CSF2-201ENST00000296871 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
CSF2-201ENST00000296871 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
CSF2-201ENST00000296871 NESP48681 1621 aa28.95■■■□□ 2.23
CSF2-201ENST00000296871 WIZO95785 1651 aa28.86■■■□□ 2.21
CSF2-201ENST00000296871 CUX2O14529 1486 aa28.82■■■□□ 2.2
CSF2-201ENST00000296871 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
CSF2-201ENST00000296871 PLPPR3Q6T4P5 718 aa28.69■■■□□ 2.18
CSF2-201ENST00000296871 RSF1Q96T23 1441 aaPredicted RBP28.68■■■□□ 2.18
CSF2-201ENST00000296871 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
CSF2-201ENST00000296871 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
CSF2-201ENST00000296871 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
CSF2-201ENST00000296871 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
CSF2-201ENST00000296871 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
CSF2-201ENST00000296871 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
CSF2-201ENST00000296871 MRC2Q9UBG0 1479 aa28.36■■■□□ 2.13
CSF2-201ENST00000296871 MSH5O43196 834 aa28.33■■■□□ 2.13
CSF2-201ENST00000296871 CFTRP13569 1480 aa28.32■■■□□ 2.12
CSF2-201ENST00000296871 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
CSF2-201ENST00000296871 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
CSF2-201ENST00000296871 WDR62O43379 1518 aa28.25■■■□□ 2.11
CSF2-201ENST00000296871 PIAS4Q8N2W9 510 aaPredicted RBP28.21■■■□□ 2.11
CSF2-201ENST00000296871 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
CSF2-201ENST00000296871 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
CSF2-201ENST00000296871 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
CSF2-201ENST00000296871 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
CSF2-201ENST00000296871 ADRA2BP18089 450 aa28■■■□□ 2.07
CSF2-201ENST00000296871 POTEDQ86YR6 584 aa27.82■■■□□ 2.04
CSF2-201ENST00000296871 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
CSF2-201ENST00000296871 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
CSF2-201ENST00000296871 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
CSF2-201ENST00000296871 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
CSF2-201ENST00000296871 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
CSF2-201ENST00000296871 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
CSF2-201ENST00000296871 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
CSF2-201ENST00000296871 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
CSF2-201ENST00000296871 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
CSF2-201ENST00000296871 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
CSF2-201ENST00000296871 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
CSF2-201ENST00000296871 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.99
CSF2-201ENST00000296871 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
CSF2-201ENST00000296871 SOGA1O94964 1423 aa27.42■■□□□ 1.98
CSF2-201ENST00000296871 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
CSF2-201ENST00000296871 CUX1P39880 1505 aa27.41■■□□□ 1.98
CSF2-201ENST00000296871 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
CSF2-201ENST00000296871 FBLN2P98095 1184 aa27.32■■□□□ 1.96
CSF2-201ENST00000296871 CHD1O14646 1710 aa27.26■■□□□ 1.95
CSF2-201ENST00000296871 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
CSF2-201ENST00000296871 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
CSF2-201ENST00000296871 RIMBP3CA6NJZ7 1639 aa27.19■■□□□ 1.94
CSF2-201ENST00000296871 RIMBP3BA6NNM3 1639 aa27.19■■□□□ 1.94
CSF2-201ENST00000296871 RIMBP3Q9UFD9 1639 aa27.19■■□□□ 1.94
CSF2-201ENST00000296871 GRIN2BQ13224 1484 aa27.14■■□□□ 1.94
CSF2-201ENST00000296871 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
CSF2-201ENST00000296871 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
CSF2-201ENST00000296871 MAGI1Q96QZ7 1491 aaPredicted RBP27.1■■□□□ 1.93
CSF2-201ENST00000296871 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
CSF2-201ENST00000296871 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
CSF2-201ENST00000296871 ABCA10Q8WWZ4 1543 aa27.08■■□□□ 1.93
CSF2-201ENST00000296871 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
CSF2-201ENST00000296871 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
CSF2-201ENST00000296871 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
CSF2-201ENST00000296871 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
CSF2-201ENST00000296871 SYNJ2O15056 1496 aa27.01■■□□□ 1.91
CSF2-201ENST00000296871 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
CSF2-201ENST00000296871 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
CSF2-201ENST00000296871 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
CSF2-201ENST00000296871 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
CSF2-201ENST00000296871 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
CSF2-201ENST00000296871 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms