RNA–Protein interactions for RNA: ENST00000296029.3

PF4-201, Transcript of platelet factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4-201ENST00000296029 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
PF4-201ENST00000296029 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
PF4-201ENST00000296029 ABCC9O60706 1549 aa37.53■■■■□ 3.6
PF4-201ENST00000296029 RB1CC1Q8TDY2 1594 aa35.9■■■■□ 3.34
PF4-201ENST00000296029 NACADO15069 1562 aa35.76■■■■□ 3.32
PF4-201ENST00000296029 DCAF8L2P0C7V8 631 aa35.5■■■■□ 3.27
PF4-201ENST00000296029 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
PF4-201ENST00000296029 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
PF4-201ENST00000296029 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
PF4-201ENST00000296029 UNC13AQ9UPW8 1703 aa35.09■■■■□ 3.21
PF4-201ENST00000296029 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
PF4-201ENST00000296029 DNAJC5BQ9UF47 199 aa34.95■■■■□ 3.19
PF4-201ENST00000296029 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
PF4-201ENST00000296029 SCRIBQ14160 1630 aa34.51■■■■□ 3.11
PF4-201ENST00000296029 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
PF4-201ENST00000296029 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
PF4-201ENST00000296029 CC2D2AQ9P2K1 1620 aa33.94■■■■□ 3.02
PF4-201ENST00000296029 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
PF4-201ENST00000296029 NCAPD3P42695 1498 aa33.03■■■□□ 2.88
PF4-201ENST00000296029 SMARCA4P51532 1647 aa33■■■□□ 2.87
PF4-201ENST00000296029 ATAD2BQ9ULI0 1458 aa32.96■■■□□ 2.87
PF4-201ENST00000296029 BAZ1AQ9NRL2 1556 aaPredicted RBP32.88■■■□□ 2.85
PF4-201ENST00000296029 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
PF4-201ENST00000296029 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
PF4-201ENST00000296029 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
PF4-201ENST00000296029 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
PF4-201ENST00000296029 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
PF4-201ENST00000296029 ERCC6Q03468 1493 aa32.36■■■□□ 2.77
PF4-201ENST00000296029 NESP48681 1621 aa32.35■■■□□ 2.77
PF4-201ENST00000296029 CUX2O14529 1486 aa32.26■■■□□ 2.75
PF4-201ENST00000296029 WIZO95785 1651 aa32.26■■■□□ 2.75
PF4-201ENST00000296029 LAMC3Q9Y6N6 1575 aa32.21■■■□□ 2.75
PF4-201ENST00000296029 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
PF4-201ENST00000296029 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
PF4-201ENST00000296029 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
PF4-201ENST00000296029 THOC2Q8NI27 1593 aaKnown RBP31.99■■■□□ 2.71
PF4-201ENST00000296029 KIF21AQ7Z4S6 1674 aa31.94■■■□□ 2.7
PF4-201ENST00000296029 TOP2AP11388 1531 aaKnown RBP31.91■■■□□ 2.7
PF4-201ENST00000296029 DNAJC5Q9H3Z4 198 aa31.85■■■□□ 2.69
PF4-201ENST00000296029 CFTRP13569 1480 aa31.74■■■□□ 2.67
PF4-201ENST00000296029 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
PF4-201ENST00000296029 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
PF4-201ENST00000296029 WDR62O43379 1518 aa31.64■■■□□ 2.66
PF4-201ENST00000296029 CEP164Q9UPV0 1460 aa31.63■■■□□ 2.65
PF4-201ENST00000296029 CCDC88BA6NC98 1476 aa31.54■■■□□ 2.64
PF4-201ENST00000296029 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
PF4-201ENST00000296029 URB2Q14146 1524 aaKnown RBP31.37■■■□□ 2.61
PF4-201ENST00000296029 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
PF4-201ENST00000296029 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
PF4-201ENST00000296029 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
PF4-201ENST00000296029 DNMBPQ6XZF7 1577 aa31■■■□□ 2.55
PF4-201ENST00000296029 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
PF4-201ENST00000296029 SUPT5HO00267 1087 aaKnown RBP30.83■■■□□ 2.53
PF4-201ENST00000296029 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
PF4-201ENST00000296029 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
PF4-201ENST00000296029 OSCARQ8IYS5 282 aa30.79■■■□□ 2.52
PF4-201ENST00000296029 EIF4G3O43432 1585 aaKnown RBP30.76■■■□□ 2.52
PF4-201ENST00000296029 CUX1P39880 1505 aa30.68■■■□□ 2.5
PF4-201ENST00000296029 AQRO60306 1485 aaKnown RBP eCLIP30.67■■■□□ 2.5
PF4-201ENST00000296029 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
PF4-201ENST00000296029 SOGA1O94964 1423 aa30.64■■■□□ 2.49
PF4-201ENST00000296029 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
PF4-201ENST00000296029 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
PF4-201ENST00000296029 TDRD9Q8NDG6 1382 aaKnown RBP30.53■■■□□ 2.48
PF4-201ENST00000296029 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
PF4-201ENST00000296029 CHD1O14646 1710 aa30.44■■■□□ 2.46
PF4-201ENST00000296029 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
PF4-201ENST00000296029 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
PF4-201ENST00000296029 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
PF4-201ENST00000296029 SNAPC4Q5SXM2 1469 aa30.36■■■□□ 2.45
PF4-201ENST00000296029 GRIN2BQ13224 1484 aa30.35■■■□□ 2.45
PF4-201ENST00000296029 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
PF4-201ENST00000296029 ABCA10Q8WWZ4 1543 aa30.33■■■□□ 2.45
PF4-201ENST00000296029 MAGI1Q96QZ7 1491 aaPredicted RBP30.32■■■□□ 2.44
PF4-201ENST00000296029 FBLN2P98095 1184 aa30.32■■■□□ 2.44
PF4-201ENST00000296029 TOP2BQ02880 1626 aa30.28■■■□□ 2.44
PF4-201ENST00000296029 BIVM-ERCC5R4GMW8 1640 aa30.28■■■□□ 2.44
PF4-201ENST00000296029 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
PF4-201ENST00000296029 WRNQ14191 1432 aaPredicted RBP eCLIP30.27■■■□□ 2.44
PF4-201ENST00000296029 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
PF4-201ENST00000296029 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
PF4-201ENST00000296029 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
PF4-201ENST00000296029 SYNJ2O15056 1496 aa30.21■■■□□ 2.43
PF4-201ENST00000296029 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
PF4-201ENST00000296029 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
PF4-201ENST00000296029 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
PF4-201ENST00000296029 CYB5RLQ6IPT4 315 aa30.03■■■□□ 2.4
PF4-201ENST00000296029 ADAMTS12P58397 1594 aa29.99■■■□□ 2.39
PF4-201ENST00000296029 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
PF4-201ENST00000296029 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
PF4-201ENST00000296029 FHAD1B1AJZ9 1412 aa29.92■■■□□ 2.38
PF4-201ENST00000296029 NUP160Q12769 1436 aa29.88■■■□□ 2.37
PF4-201ENST00000296029 CEP170Q5SW79 1584 aa29.83■■■□□ 2.37
PF4-201ENST00000296029 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
PF4-201ENST00000296029 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
PF4-201ENST00000296029 KIF27Q86VH2 1401 aa29.67■■■□□ 2.34
PF4-201ENST00000296029 IGF1RP08069 1367 aa29.64■■■□□ 2.34
PF4-201ENST00000296029 CUL7Q14999 1698 aa29.56■■■□□ 2.32
PF4-201ENST00000296029 RUSC2Q8N2Y8 1516 aa29.56■■■□□ 2.32
PF4-201ENST00000296029 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms