RNA–Protein interactions for RNA: ENST00000295839.9

PPM1L-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1L, humanhuman

TSL 1 (best) BASIC

Gene PPM1L, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1L-201ENST00000295839 NISCHQ9Y2I1 1504 aa33.55■■■□□ 2.96
PPM1L-201ENST00000295839 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
PPM1L-201ENST00000295839 ABCC9O60706 1549 aa29.1■■■□□ 2.25
PPM1L-201ENST00000295839 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
PPM1L-201ENST00000295839 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
PPM1L-201ENST00000295839 NACADO15069 1562 aa28.02■■■□□ 2.08
PPM1L-201ENST00000295839 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
PPM1L-201ENST00000295839 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
PPM1L-201ENST00000295839 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
PPM1L-201ENST00000295839 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
PPM1L-201ENST00000295839 SCRIBQ14160 1630 aa27.24■■□□□ 1.95
PPM1L-201ENST00000295839 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
PPM1L-201ENST00000295839 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
PPM1L-201ENST00000295839 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
PPM1L-201ENST00000295839 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
PPM1L-201ENST00000295839 EIF4G1Q04637 1599 aaKnown RBP26.44■■□□□ 1.82
PPM1L-201ENST00000295839 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
PPM1L-201ENST00000295839 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
PPM1L-201ENST00000295839 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
PPM1L-201ENST00000295839 SMARCA4P51532 1647 aa26.04■■□□□ 1.76
PPM1L-201ENST00000295839 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
PPM1L-201ENST00000295839 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
PPM1L-201ENST00000295839 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
PPM1L-201ENST00000295839 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
PPM1L-201ENST00000295839 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
PPM1L-201ENST00000295839 HMGXB3Q12766 1538 aa25.7■■□□□ 1.71
PPM1L-201ENST00000295839 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
PPM1L-201ENST00000295839 WIZO95785 1651 aa25.62■■□□□ 1.69
PPM1L-201ENST00000295839 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
PPM1L-201ENST00000295839 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
PPM1L-201ENST00000295839 NESP48681 1621 aa25.17■■□□□ 1.62
PPM1L-201ENST00000295839 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
PPM1L-201ENST00000295839 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
PPM1L-201ENST00000295839 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
PPM1L-201ENST00000295839 CADPSQ9ULU8 1353 aa25.09■■□□□ 1.61
PPM1L-201ENST00000295839 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
PPM1L-201ENST00000295839 PDS5BQ9NTI5 1447 aa25.02■■□□□ 1.6
PPM1L-201ENST00000295839 CFTRP13569 1480 aa24.94■■□□□ 1.58
PPM1L-201ENST00000295839 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
PPM1L-201ENST00000295839 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
PPM1L-201ENST00000295839 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
PPM1L-201ENST00000295839 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
PPM1L-201ENST00000295839 CUX2O14529 1486 aa24.76■■□□□ 1.55
PPM1L-201ENST00000295839 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
PPM1L-201ENST00000295839 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
PPM1L-201ENST00000295839 WDR62O43379 1518 aa24.61■■□□□ 1.53
PPM1L-201ENST00000295839 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
PPM1L-201ENST00000295839 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
PPM1L-201ENST00000295839 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
PPM1L-201ENST00000295839 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
PPM1L-201ENST00000295839 IFT140Q96RY7 1462 aa24.26■■□□□ 1.47
PPM1L-201ENST00000295839 CUX1P39880 1505 aa24.24■■□□□ 1.47
PPM1L-201ENST00000295839 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
PPM1L-201ENST00000295839 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
PPM1L-201ENST00000295839 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
PPM1L-201ENST00000295839 SOGA1O94964 1423 aa24.15■■□□□ 1.46
PPM1L-201ENST00000295839 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
PPM1L-201ENST00000295839 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
PPM1L-201ENST00000295839 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PPM1L-201ENST00000295839 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
PPM1L-201ENST00000295839 BIVM-ERCC5R4GMW8 1640 aa24.09■■□□□ 1.45
PPM1L-201ENST00000295839 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
PPM1L-201ENST00000295839 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
PPM1L-201ENST00000295839 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
PPM1L-201ENST00000295839 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
PPM1L-201ENST00000295839 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
PPM1L-201ENST00000295839 ABCA10Q8WWZ4 1543 aa23.93■■□□□ 1.42
PPM1L-201ENST00000295839 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
PPM1L-201ENST00000295839 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
PPM1L-201ENST00000295839 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
PPM1L-201ENST00000295839 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
PPM1L-201ENST00000295839 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.4
PPM1L-201ENST00000295839 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
PPM1L-201ENST00000295839 FBLN2P98095 1184 aa23.81■■□□□ 1.4
PPM1L-201ENST00000295839 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
PPM1L-201ENST00000295839 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
PPM1L-201ENST00000295839 CHD1O14646 1710 aa23.77■■□□□ 1.4
PPM1L-201ENST00000295839 TRIM41Q8WV44 630 aa23.75■■□□□ 1.39
PPM1L-201ENST00000295839 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
PPM1L-201ENST00000295839 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
PPM1L-201ENST00000295839 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
PPM1L-201ENST00000295839 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
PPM1L-201ENST00000295839 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
PPM1L-201ENST00000295839 FHAD1B1AJZ9 1412 aa23.59■■□□□ 1.37
PPM1L-201ENST00000295839 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
PPM1L-201ENST00000295839 CUL7Q14999 1698 aa23.52■■□□□ 1.36
PPM1L-201ENST00000295839 IGF1RP08069 1367 aa23.5■■□□□ 1.35
PPM1L-201ENST00000295839 CLASP1Q7Z460 1538 aa23.44■■□□□ 1.34
PPM1L-201ENST00000295839 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
PPM1L-201ENST00000295839 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
PPM1L-201ENST00000295839 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
PPM1L-201ENST00000295839 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
PPM1L-201ENST00000295839 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
PPM1L-201ENST00000295839 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
PPM1L-201ENST00000295839 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
PPM1L-201ENST00000295839 NUP160Q12769 1436 aa23.38■■□□□ 1.33
PPM1L-201ENST00000295839 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
PPM1L-201ENST00000295839 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
PPM1L-201ENST00000295839 EEA1Q15075 1411 aa23.29■■□□□ 1.32
PPM1L-201ENST00000295839 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms