RNA–Protein interactions for RNA: ENST00000293604.10

C6orf136-201, Transcript of chromosome 6 open reading frame 136, humanhuman

TSL 1 (best) BASIC

Gene C6orf136, Length 1,978 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf136-201ENST00000293604 SF3B1O75533 1304 aaKnown RBP eCLIP22.33■■□□□ 1.167e-12■■■■■ 77.5
C6orf136-201ENST00000293604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.07■■□□□ 1.283e-8■■■■■ 74.5
C6orf136-201ENST00000293604 U2AF1Q01081 240 aaKnown RBP eCLIP28.13■■■□□ 2.091e-13■■■■■ 59.9
C6orf136-201ENST00000293604 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.82■□□□□ 0.922e-12■■■■■ 50.4
C6orf136-201ENST00000293604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.16■■■□□ 2.426e-9■■■■■ 28
C6orf136-201ENST00000293604 EFTUD2Q15029 972 aaKnown RBP eCLIP22.69■■□□□ 1.228e-24■■■■■ 27.9
C6orf136-201ENST00000293604 U2AF2P26368 475 aaKnown RBP eCLIP25.13■■□□□ 1.613e-21■■■■□ 26.3
C6orf136-201ENST00000293604 PCBP1Q15365 356 aaKnown RBP eCLIP22.87■■□□□ 1.254e-7■■■■□ 25.4
C6orf136-201ENST00000293604 RPS3P23396 243 aaKnown RBP eCLIP21.33■■□□□ 1.017e-7■■■■□ 25.3
C6orf136-201ENST00000293604 DDX6P26196 483 aaKnown RBP eCLIP21.47■■□□□ 1.032e-6■■■■□ 24.5
C6orf136-201ENST00000293604 PPIGQ13427 754 aaKnown RBP eCLIP21.56■■□□□ 1.042e-11■■■■□ 24.1
C6orf136-201ENST00000293604 AQRO60306 1485 aaKnown RBP eCLIP32.7■■■□□ 2.822e-8■■■■□ 23.1
C6orf136-201ENST00000293604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.66■□□□□ 0.262e-7■■■■□ 19.3
C6orf136-201ENST00000293604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.92■■□□□ 1.743e-7■■■□□ 17.5
C6orf136-201ENST00000293604 HNRNPKP61978 463 aaKnown RBP eCLIP20.12■□□□□ 0.811e-8■■■□□ 17
C6orf136-201ENST00000293604 PCBP2Q15366 365 aaKnown RBP eCLIP21.43■■□□□ 1.027e-9■■■□□ 16.5
C6orf136-201ENST00000293604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.72■■□□□ 1.392e-6■■■□□ 15.6
C6orf136-201ENST00000293604 SF3B4Q15427 424 aaKnown RBP eCLIP20.59■□□□□ 0.891e-7■■□□□ 13.6
C6orf136-201ENST00000293604 DDX3XO00571 662 aaKnown RBP eCLIP23.62■■□□□ 1.379e-8■■□□□ 12.7
C6orf136-201ENST00000293604 NCBP2P52298 156 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■□□□ 12.6
C6orf136-201ENST00000293604 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■□□□ 12
C6orf136-201ENST00000293604 PUM1Q14671 1186 aaKnown RBP eCLIP20.65■□□□□ 0.94e-7■■□□□ 11.8
C6orf136-201ENST00000293604 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.86■□□□□ 0.935e-10■□□□□ 9.8
C6orf136-201ENST00000293604 ILF3Q12906 894 aaKnown RBP eCLIP20.41■□□□□ 0.863e-10■□□□□ 8.1
Retrieved 24 of 24 RNA–protein pairs in 8.2 ms