RNA–Protein interactions for RNA: ENST00000292114.7

TMEM199-201, Transcript of transmembrane protein 199, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM199, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-201ENST00000292114 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
TMEM199-201ENST00000292114 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
TMEM199-201ENST00000292114 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
TMEM199-201ENST00000292114 PELP1Q8IZL8 1130 aaKnown RBP20.7■□□□□ 0.9
TMEM199-201ENST00000292114 HRCP23327 699 aa20.66■□□□□ 0.9
TMEM199-201ENST00000292114 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
TMEM199-201ENST00000292114 PCGF6Q9BYE7 350 aa20.48■□□□□ 0.87
TMEM199-201ENST00000292114 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
TMEM199-201ENST00000292114 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
TMEM199-201ENST00000292114 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
TMEM199-201ENST00000292114 DCAF8L2P0C7V8 631 aa19.99■□□□□ 0.79
TMEM199-201ENST00000292114 MYT1Q01538 1121 aa19.99■□□□□ 0.79
TMEM199-201ENST00000292114 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
TMEM199-201ENST00000292114 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
TMEM199-201ENST00000292114 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
TMEM199-201ENST00000292114 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
TMEM199-201ENST00000292114 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
TMEM199-201ENST00000292114 ZEB1P37275 1124 aaPredicted RBP19.44■□□□□ 0.7
TMEM199-201ENST00000292114 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
TMEM199-201ENST00000292114 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
TMEM199-201ENST00000292114 GTF3C3Q9Y5Q9 886 aa19.35■□□□□ 0.69
TMEM199-201ENST00000292114 NEUROD1Q13562 356 aa19.31■□□□□ 0.68
TMEM199-201ENST00000292114 ACIN1Q9UKV3 1341 aaKnown RBP19.27■□□□□ 0.68
TMEM199-201ENST00000292114 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
TMEM199-201ENST00000292114 CENPBP07199 599 aaPredicted RBP19.06■□□□□ 0.64
TMEM199-201ENST00000292114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
TMEM199-201ENST00000292114 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
TMEM199-201ENST00000292114 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
TMEM199-201ENST00000292114 YTHDC1Q96MU7 727 aaKnown RBP18.93■□□□□ 0.62
TMEM199-201ENST00000292114 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
TMEM199-201ENST00000292114 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
TMEM199-201ENST00000292114 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
TMEM199-201ENST00000292114 ABCC9O60706 1549 aa18.67■□□□□ 0.58
TMEM199-201ENST00000292114 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
TMEM199-201ENST00000292114 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
TMEM199-201ENST00000292114 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
TMEM199-201ENST00000292114 ANP32EQ9BTT0 268 aa18.5■□□□□ 0.55
TMEM199-201ENST00000292114 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
TMEM199-201ENST00000292114 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
TMEM199-201ENST00000292114 MIER1Q8N108 512 aa18.39■□□□□ 0.53
TMEM199-201ENST00000292114 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
TMEM199-201ENST00000292114 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
TMEM199-201ENST00000292114 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
TMEM199-201ENST00000292114 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
TMEM199-201ENST00000292114 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
TMEM199-201ENST00000292114 NACADO15069 1562 aa18.18■□□□□ 0.5
TMEM199-201ENST00000292114 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
TMEM199-201ENST00000292114 WIZO95785 1651 aa18.13■□□□□ 0.49
TMEM199-201ENST00000292114 RANGAP1P46060 587 aaPredicted RBP18.11■□□□□ 0.49
TMEM199-201ENST00000292114 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
TMEM199-201ENST00000292114 SUPT16HQ9Y5B9 1047 aaKnown RBP18.1■□□□□ 0.49
TMEM199-201ENST00000292114 BCANQ96GW7 911 aa18.1■□□□□ 0.49
TMEM199-201ENST00000292114 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
TMEM199-201ENST00000292114 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
TMEM199-201ENST00000292114 SOGA1O94964 1423 aa18.06■□□□□ 0.48
TMEM199-201ENST00000292114 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
TMEM199-201ENST00000292114 APLP2Q06481 763 aa18.02■□□□□ 0.48
TMEM199-201ENST00000292114 TNIKQ9UKE5 1360 aa18.02■□□□□ 0.48
TMEM199-201ENST00000292114 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
TMEM199-201ENST00000292114 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
TMEM199-201ENST00000292114 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
TMEM199-201ENST00000292114 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
TMEM199-201ENST00000292114 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
TMEM199-201ENST00000292114 CLSPNQ9HAW4 1339 aa17.8■□□□□ 0.44
TMEM199-201ENST00000292114 CLIP1P30622 1438 aa17.78■□□□□ 0.44
TMEM199-201ENST00000292114 EEA1Q15075 1411 aa17.77■□□□□ 0.44
TMEM199-201ENST00000292114 RBM19Q9Y4C8 960 aaKnown RBP17.75■□□□□ 0.43
TMEM199-201ENST00000292114 ITGAEP38570 1179 aa17.73■□□□□ 0.43
TMEM199-201ENST00000292114 KCNH8Q96L42 1107 aa17.73■□□□□ 0.43
TMEM199-201ENST00000292114 CCDC136Q96JN2 1154 aa17.72■□□□□ 0.43
TMEM199-201ENST00000292114 FKBP8Q14318 412 aa17.71■□□□□ 0.43
TMEM199-201ENST00000292114 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
TMEM199-201ENST00000292114 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
TMEM199-201ENST00000292114 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
TMEM199-201ENST00000292114 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
TMEM199-201ENST00000292114 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
TMEM199-201ENST00000292114 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.42
TMEM199-201ENST00000292114 NEFLP07196 543 aa17.6■□□□□ 0.41
TMEM199-201ENST00000292114 MSH5O43196 834 aa17.59■□□□□ 0.41
TMEM199-201ENST00000292114 DEKP35659 375 aaKnown RBP17.59■□□□□ 0.41
TMEM199-201ENST00000292114 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
TMEM199-201ENST00000292114 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
TMEM199-201ENST00000292114 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
TMEM199-201ENST00000292114 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
TMEM199-201ENST00000292114 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
TMEM199-201ENST00000292114 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
TMEM199-201ENST00000292114 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
TMEM199-201ENST00000292114 RTN4Q9NQC3 1192 aaKnown RBP17.52■□□□□ 0.4
TMEM199-201ENST00000292114 NBR1Q14596 966 aa17.5■□□□□ 0.39
TMEM199-201ENST00000292114 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
TMEM199-201ENST00000292114 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
TMEM199-201ENST00000292114 KIF21BO75037 1637 aa17.46■□□□□ 0.39
TMEM199-201ENST00000292114 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
TMEM199-201ENST00000292114 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
TMEM199-201ENST00000292114 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
TMEM199-201ENST00000292114 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
TMEM199-201ENST00000292114 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
TMEM199-201ENST00000292114 ANP32CO43423 234 aa17.34■□□□□ 0.37
TMEM199-201ENST00000292114 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
TMEM199-201ENST00000292114 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms