RNA–Protein interactions for RNA: ENST00000291823.2

HIPK4-201, Transcript of homeodomain interacting protein kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK4, Length 2,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4-201ENST00000291823 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
HIPK4-201ENST00000291823 PELP1Q8IZL8 1130 aaKnown RBP26.25■■□□□ 1.79
HIPK4-201ENST00000291823 HRCP23327 699 aa25.57■■□□□ 1.68
HIPK4-201ENST00000291823 MYT1Q01538 1121 aa25.54■■□□□ 1.68
HIPK4-201ENST00000291823 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
HIPK4-201ENST00000291823 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
HIPK4-201ENST00000291823 MYO15BQ96JP2 1530 aa25.03■■□□□ 1.6
HIPK4-201ENST00000291823 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
HIPK4-201ENST00000291823 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
HIPK4-201ENST00000291823 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
HIPK4-201ENST00000291823 PCGF6Q9BYE7 350 aa24.86■■□□□ 1.57
HIPK4-201ENST00000291823 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
HIPK4-201ENST00000291823 SCAF1Q9H7N4 1312 aaKnown RBP24.81■■□□□ 1.56
HIPK4-201ENST00000291823 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
HIPK4-201ENST00000291823 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
HIPK4-201ENST00000291823 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
HIPK4-201ENST00000291823 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
HIPK4-201ENST00000291823 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
HIPK4-201ENST00000291823 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
HIPK4-201ENST00000291823 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
HIPK4-201ENST00000291823 BCL11AQ9H165 835 aa23.81■■□□□ 1.4
HIPK4-201ENST00000291823 PRKCSHP14314 528 aaPredicted RBP23.73■■□□□ 1.39
HIPK4-201ENST00000291823 NEUROD1Q13562 356 aa23.73■■□□□ 1.39
HIPK4-201ENST00000291823 ABCC9O60706 1549 aa23.7■■□□□ 1.38
HIPK4-201ENST00000291823 GTF3C3Q9Y5Q9 886 aa23.69■■□□□ 1.38
HIPK4-201ENST00000291823 FAM9AQ8IZU1 332 aaPredicted RBP23.61■■□□□ 1.37
HIPK4-201ENST00000291823 CENPBP07199 599 aaPredicted RBP23.52■■□□□ 1.36
HIPK4-201ENST00000291823 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
HIPK4-201ENST00000291823 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
HIPK4-201ENST00000291823 RB1CC1Q8TDY2 1594 aa23.3■■□□□ 1.32
HIPK4-201ENST00000291823 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
HIPK4-201ENST00000291823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
HIPK4-201ENST00000291823 ERICH6Q7L0X2 663 aa23.09■■□□□ 1.29
HIPK4-201ENST00000291823 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.29
HIPK4-201ENST00000291823 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
HIPK4-201ENST00000291823 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
HIPK4-201ENST00000291823 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
HIPK4-201ENST00000291823 APLP2Q06481 763 aa22.96■■□□□ 1.27
HIPK4-201ENST00000291823 CSRNP3Q8WYN3 585 aa22.88■■□□□ 1.25
HIPK4-201ENST00000291823 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
HIPK4-201ENST00000291823 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
HIPK4-201ENST00000291823 NACADO15069 1562 aa22.78■■□□□ 1.24
HIPK4-201ENST00000291823 WIZO95785 1651 aa22.77■■□□□ 1.24
HIPK4-201ENST00000291823 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
HIPK4-201ENST00000291823 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
HIPK4-201ENST00000291823 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
HIPK4-201ENST00000291823 ZNF316A6NFI3 1004 aaPredicted RBP22.68■■□□□ 1.22
HIPK4-201ENST00000291823 YTHDC1Q96MU7 727 aaKnown RBP22.58■■□□□ 1.21
HIPK4-201ENST00000291823 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
HIPK4-201ENST00000291823 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
HIPK4-201ENST00000291823 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
HIPK4-201ENST00000291823 MIER1Q8N108 512 aa22.46■■□□□ 1.19
HIPK4-201ENST00000291823 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
HIPK4-201ENST00000291823 CCDC88BA6NC98 1476 aa22.43■■□□□ 1.18
HIPK4-201ENST00000291823 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
HIPK4-201ENST00000291823 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
HIPK4-201ENST00000291823 EEA1Q15075 1411 aa22.33■■□□□ 1.16
HIPK4-201ENST00000291823 SOGA1O94964 1423 aa22.32■■□□□ 1.16
HIPK4-201ENST00000291823 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
HIPK4-201ENST00000291823 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
HIPK4-201ENST00000291823 ANO8Q9HCE9 1232 aaPredicted RBP22.22■■□□□ 1.15
HIPK4-201ENST00000291823 CLSPNQ9HAW4 1339 aa22.22■■□□□ 1.15
HIPK4-201ENST00000291823 GOLGA3Q08378 1498 aa22.21■■□□□ 1.15
HIPK4-201ENST00000291823 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
HIPK4-201ENST00000291823 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
HIPK4-201ENST00000291823 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
HIPK4-201ENST00000291823 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
HIPK4-201ENST00000291823 KIF21BO75037 1637 aa22.03■■□□□ 1.12
HIPK4-201ENST00000291823 CEP164Q9UPV0 1460 aa22.01■■□□□ 1.11
HIPK4-201ENST00000291823 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
HIPK4-201ENST00000291823 CLIP1P30622 1438 aa21.98■■□□□ 1.11
HIPK4-201ENST00000291823 SYNJ1O43426 1573 aa21.89■■□□□ 1.09
HIPK4-201ENST00000291823 UBE2Q2Q8WVN8 375 aa21.89■■□□□ 1.09
HIPK4-201ENST00000291823 BAZ1BQ9UIG0 1483 aaKnown RBP21.89■■□□□ 1.09
HIPK4-201ENST00000291823 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
HIPK4-201ENST00000291823 DHX57Q6P158 1386 aaKnown RBP21.88■■□□□ 1.09
HIPK4-201ENST00000291823 RBM19Q9Y4C8 960 aaKnown RBP21.86■■□□□ 1.09
HIPK4-201ENST00000291823 SALL2Q9Y467 1007 aaPredicted RBP21.85■■□□□ 1.09
HIPK4-201ENST00000291823 MSH5O43196 834 aa21.82■■□□□ 1.08
HIPK4-201ENST00000291823 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
HIPK4-201ENST00000291823 CCDC136Q96JN2 1154 aa21.74■■□□□ 1.07
HIPK4-201ENST00000291823 DEKP35659 375 aaKnown RBP21.72■■□□□ 1.07
HIPK4-201ENST00000291823 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
HIPK4-201ENST00000291823 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
HIPK4-201ENST00000291823 BCANQ96GW7 911 aa21.66■■□□□ 1.06
HIPK4-201ENST00000291823 EIF5BO60841 1220 aaKnown RBP21.63■■□□□ 1.05
HIPK4-201ENST00000291823 SLC24A1O60721 1099 aa21.62■■□□□ 1.05
HIPK4-201ENST00000291823 ERICH6BQ5W0A0 696 aa21.62■■□□□ 1.05
HIPK4-201ENST00000291823 CUX2O14529 1486 aa21.62■■□□□ 1.05
HIPK4-201ENST00000291823 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
HIPK4-201ENST00000291823 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
HIPK4-201ENST00000291823 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
HIPK4-201ENST00000291823 KCNH8Q96L42 1107 aa21.57■■□□□ 1.04
HIPK4-201ENST00000291823 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
HIPK4-201ENST00000291823 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
HIPK4-201ENST00000291823 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
HIPK4-201ENST00000291823 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
HIPK4-201ENST00000291823 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
HIPK4-201ENST00000291823 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
HIPK4-201ENST00000291823 FKBP8Q14318 412 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms