RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
PDE6D-201ENST00000287600 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
PDE6D-201ENST00000287600 ABCC9O60706 1549 aa34.05■■■■□ 3.04
PDE6D-201ENST00000287600 AEBP2Q6ZN18 517 aaPredicted RBP33.36■■■□□ 2.93
PDE6D-201ENST00000287600 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
PDE6D-201ENST00000287600 NACADO15069 1562 aa32.19■■■□□ 2.74
PDE6D-201ENST00000287600 CHIC1Q5VXU3 224 aa32.18■■■□□ 2.74
PDE6D-201ENST00000287600 DCAF8L2P0C7V8 631 aa31.98■■■□□ 2.71
PDE6D-201ENST00000287600 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
PDE6D-201ENST00000287600 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
PDE6D-201ENST00000287600 MYO15BQ96JP2 1530 aa31.72■■■□□ 2.67
PDE6D-201ENST00000287600 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
PDE6D-201ENST00000287600 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
PDE6D-201ENST00000287600 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
PDE6D-201ENST00000287600 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
PDE6D-201ENST00000287600 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
PDE6D-201ENST00000287600 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
PDE6D-201ENST00000287600 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
PDE6D-201ENST00000287600 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
PDE6D-201ENST00000287600 CECR2Q9BXF3 1484 aa30.67■■■□□ 2.5
PDE6D-201ENST00000287600 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
PDE6D-201ENST00000287600 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
PDE6D-201ENST00000287600 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
PDE6D-201ENST00000287600 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
PDE6D-201ENST00000287600 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
PDE6D-201ENST00000287600 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
PDE6D-201ENST00000287600 ERCC6Q03468 1493 aa29.44■■■□□ 2.3
PDE6D-201ENST00000287600 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
PDE6D-201ENST00000287600 CUX2O14529 1486 aa29.36■■■□□ 2.29
PDE6D-201ENST00000287600 PEG3Q9GZU2 1588 aa29.31■■■□□ 2.28
PDE6D-201ENST00000287600 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
PDE6D-201ENST00000287600 NESP48681 1621 aa29.24■■■□□ 2.27
PDE6D-201ENST00000287600 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
PDE6D-201ENST00000287600 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
PDE6D-201ENST00000287600 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
PDE6D-201ENST00000287600 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
PDE6D-201ENST00000287600 WIZO95785 1651 aa28.91■■■□□ 2.22
PDE6D-201ENST00000287600 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
PDE6D-201ENST00000287600 CADPSQ9ULU8 1353 aa28.77■■■□□ 2.2
PDE6D-201ENST00000287600 MRC2Q9UBG0 1479 aa28.65■■■□□ 2.18
PDE6D-201ENST00000287600 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
PDE6D-201ENST00000287600 WDR62O43379 1518 aa28.59■■■□□ 2.17
PDE6D-201ENST00000287600 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
PDE6D-201ENST00000287600 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
PDE6D-201ENST00000287600 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
PDE6D-201ENST00000287600 CFTRP13569 1480 aa28.46■■■□□ 2.15
PDE6D-201ENST00000287600 PHF23Q9BUL5 403 aaPredicted RBP28.32■■■□□ 2.12
PDE6D-201ENST00000287600 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
PDE6D-201ENST00000287600 SENP3Q9H4L4 574 aaPredicted RBP28.27■■■□□ 2.12
PDE6D-201ENST00000287600 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
PDE6D-201ENST00000287600 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
PDE6D-201ENST00000287600 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
PDE6D-201ENST00000287600 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
PDE6D-201ENST00000287600 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
PDE6D-201ENST00000287600 TOPBP1Q92547 1522 aa27.95■■■□□ 2.06
PDE6D-201ENST00000287600 ZNF608Q9ULD9 1512 aaPredicted RBP27.89■■■□□ 2.06
PDE6D-201ENST00000287600 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
PDE6D-201ENST00000287600 DNMBPQ6XZF7 1577 aa27.88■■■□□ 2.05
PDE6D-201ENST00000287600 EIF4G3O43432 1585 aaKnown RBP27.81■■■□□ 2.04
PDE6D-201ENST00000287600 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
PDE6D-201ENST00000287600 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
PDE6D-201ENST00000287600 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
PDE6D-201ENST00000287600 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
PDE6D-201ENST00000287600 POLA1P09884 1462 aaPredicted RBP27.66■■■□□ 2.02
PDE6D-201ENST00000287600 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
PDE6D-201ENST00000287600 CHD1O14646 1710 aa27.61■■■□□ 2.01
PDE6D-201ENST00000287600 ARHGEF11O15085 1522 aa27.57■■■□□ 2
PDE6D-201ENST00000287600 RAD54L2Q9Y4B4 1467 aa27.55■■■□□ 2
PDE6D-201ENST00000287600 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
PDE6D-201ENST00000287600 SOGA1O94964 1423 aa27.5■■□□□ 1.99
PDE6D-201ENST00000287600 CUX1P39880 1505 aa27.46■■□□□ 1.99
PDE6D-201ENST00000287600 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
PDE6D-201ENST00000287600 FBLN2P98095 1184 aa27.45■■□□□ 1.98
PDE6D-201ENST00000287600 TDRD9Q8NDG6 1382 aaKnown RBP27.45■■□□□ 1.98
PDE6D-201ENST00000287600 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
PDE6D-201ENST00000287600 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
PDE6D-201ENST00000287600 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
PDE6D-201ENST00000287600 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
PDE6D-201ENST00000287600 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
PDE6D-201ENST00000287600 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
PDE6D-201ENST00000287600 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
PDE6D-201ENST00000287600 SYNJ1O43426 1573 aa27.26■■□□□ 1.96
PDE6D-201ENST00000287600 CLASP1Q7Z460 1538 aa27.25■■□□□ 1.95
PDE6D-201ENST00000287600 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
PDE6D-201ENST00000287600 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
PDE6D-201ENST00000287600 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
PDE6D-201ENST00000287600 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
PDE6D-201ENST00000287600 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
PDE6D-201ENST00000287600 BIVM-ERCC5R4GMW8 1640 aa27.07■■□□□ 1.92
PDE6D-201ENST00000287600 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
PDE6D-201ENST00000287600 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
PDE6D-201ENST00000287600 TRHP20396 242 aaPredicted RBP27.04■■□□□ 1.92
PDE6D-201ENST00000287600 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
PDE6D-201ENST00000287600 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
PDE6D-201ENST00000287600 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
PDE6D-201ENST00000287600 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
PDE6D-201ENST00000287600 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
PDE6D-201ENST00000287600 NUP160Q12769 1436 aa26.84■■□□□ 1.89
PDE6D-201ENST00000287600 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
PDE6D-201ENST00000287600 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms