RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 NISCHQ9Y2I1 1504 aa41.87■■■■■ 4.29
ATG3-201ENST00000283290 CCDC180Q9P1Z9 1646 aa37.22■■■■□ 3.55
ATG3-201ENST00000283290 ABCC9O60706 1549 aa36.35■■■■□ 3.41
ATG3-201ENST00000283290 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
ATG3-201ENST00000283290 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.18
ATG3-201ENST00000283290 NACADO15069 1562 aa34.92■■■■□ 3.18
ATG3-201ENST00000283290 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
ATG3-201ENST00000283290 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
ATG3-201ENST00000283290 DCAF1Q9Y4B6 1507 aa34.61■■■■□ 3.13
ATG3-201ENST00000283290 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
ATG3-201ENST00000283290 SCRIBQ14160 1630 aa34.01■■■■□ 3.04
ATG3-201ENST00000283290 BICRAQ9NZM4 1560 aa33.95■■■■□ 3.03
ATG3-201ENST00000283290 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
ATG3-201ENST00000283290 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
ATG3-201ENST00000283290 DNAJC5BQ9UF47 199 aa33.27■■■□□ 2.92
ATG3-201ENST00000283290 EIF4G1Q04637 1599 aaKnown RBP33.03■■■□□ 2.88
ATG3-201ENST00000283290 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
ATG3-201ENST00000283290 CECR2Q9BXF3 1484 aa32.65■■■□□ 2.82
ATG3-201ENST00000283290 SMARCA4P51532 1647 aa32.51■■■□□ 2.8
ATG3-201ENST00000283290 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.78
ATG3-201ENST00000283290 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
ATG3-201ENST00000283290 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
ATG3-201ENST00000283290 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
ATG3-201ENST00000283290 NCAPD3P42695 1498 aa32.21■■■□□ 2.75
ATG3-201ENST00000283290 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
ATG3-201ENST00000283290 HMGXB3Q12766 1538 aa32.09■■■□□ 2.73
ATG3-201ENST00000283290 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
ATG3-201ENST00000283290 WIZO95785 1651 aa32.01■■■□□ 2.72
ATG3-201ENST00000283290 RSF1Q96T23 1441 aaPredicted RBP31.96■■■□□ 2.71
ATG3-201ENST00000283290 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
ATG3-201ENST00000283290 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
ATG3-201ENST00000283290 NESP48681 1621 aa31.5■■■□□ 2.63
ATG3-201ENST00000283290 LAMC3Q9Y6N6 1575 aa31.38■■■□□ 2.61
ATG3-201ENST00000283290 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
ATG3-201ENST00000283290 CADPSQ9ULU8 1353 aa31.27■■■□□ 2.6
ATG3-201ENST00000283290 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
ATG3-201ENST00000283290 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
ATG3-201ENST00000283290 CFTRP13569 1480 aa31.13■■■□□ 2.57
ATG3-201ENST00000283290 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
ATG3-201ENST00000283290 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.55
ATG3-201ENST00000283290 PRDM2Q13029 1718 aa31.01■■■□□ 2.55
ATG3-201ENST00000283290 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.55
ATG3-201ENST00000283290 CUX2O14529 1486 aa30.9■■■□□ 2.54
ATG3-201ENST00000283290 CEP164Q9UPV0 1460 aa30.9■■■□□ 2.54
ATG3-201ENST00000283290 MRC2Q9UBG0 1479 aa30.84■■■□□ 2.53
ATG3-201ENST00000283290 WDR62O43379 1518 aa30.75■■■□□ 2.51
ATG3-201ENST00000283290 URB2Q14146 1524 aaKnown RBP30.67■■■□□ 2.5
ATG3-201ENST00000283290 TOPBP1Q92547 1522 aa30.48■■■□□ 2.47
ATG3-201ENST00000283290 DNMBPQ6XZF7 1577 aa30.46■■■□□ 2.47
ATG3-201ENST00000283290 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
ATG3-201ENST00000283290 CUX1P39880 1505 aa30.3■■■□□ 2.44
ATG3-201ENST00000283290 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
ATG3-201ENST00000283290 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
ATG3-201ENST00000283290 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
ATG3-201ENST00000283290 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
ATG3-201ENST00000283290 ZNF608Q9ULD9 1512 aaPredicted RBP30.15■■■□□ 2.42
ATG3-201ENST00000283290 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
ATG3-201ENST00000283290 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
ATG3-201ENST00000283290 WRNQ14191 1432 aaPredicted RBP eCLIP30.1■■■□□ 2.41
ATG3-201ENST00000283290 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
ATG3-201ENST00000283290 SOGA1O94964 1423 aa30.07■■■□□ 2.4
ATG3-201ENST00000283290 TOP2BQ02880 1626 aa30.06■■■□□ 2.4
ATG3-201ENST00000283290 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
ATG3-201ENST00000283290 WDR97A6NE52 1622 aa29.98■■■□□ 2.39
ATG3-201ENST00000283290 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.39
ATG3-201ENST00000283290 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
ATG3-201ENST00000283290 ABCA10Q8WWZ4 1543 aa29.86■■■□□ 2.37
ATG3-201ENST00000283290 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
ATG3-201ENST00000283290 ABCA5Q8WWZ7 1642 aa29.78■■■□□ 2.36
ATG3-201ENST00000283290 PBRM1Q86U86 1689 aa29.76■■■□□ 2.36
ATG3-201ENST00000283290 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
ATG3-201ENST00000283290 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
ATG3-201ENST00000283290 SNAPC4Q5SXM2 1469 aa29.7■■■□□ 2.34
ATG3-201ENST00000283290 CHD1O14646 1710 aa29.7■■■□□ 2.34
ATG3-201ENST00000283290 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
ATG3-201ENST00000283290 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
ATG3-201ENST00000283290 OSCARQ8IYS5 282 aa29.6■■■□□ 2.33
ATG3-201ENST00000283290 FBLN2P98095 1184 aa29.57■■■□□ 2.32
ATG3-201ENST00000283290 CHIC1Q5VXU3 224 aa29.53■■■□□ 2.32
ATG3-201ENST00000283290 SYNJ2O15056 1496 aa29.52■■■□□ 2.32
ATG3-201ENST00000283290 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
ATG3-201ENST00000283290 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
ATG3-201ENST00000283290 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
ATG3-201ENST00000283290 RUSC2Q8N2Y8 1516 aa29.46■■■□□ 2.31
ATG3-201ENST00000283290 KIF27Q86VH2 1401 aa29.44■■■□□ 2.3
ATG3-201ENST00000283290 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
ATG3-201ENST00000283290 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
ATG3-201ENST00000283290 IGF1RP08069 1367 aa29.31■■■□□ 2.28
ATG3-201ENST00000283290 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
ATG3-201ENST00000283290 CUL7Q14999 1698 aa29.29■■■□□ 2.28
ATG3-201ENST00000283290 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
ATG3-201ENST00000283290 RIMBP3CA6NJZ7 1639 aa29.23■■■□□ 2.27
ATG3-201ENST00000283290 RIMBP3BA6NNM3 1639 aa29.23■■■□□ 2.27
ATG3-201ENST00000283290 RIMBP3Q9UFD9 1639 aa29.23■■■□□ 2.27
ATG3-201ENST00000283290 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
ATG3-201ENST00000283290 ARHGEF11O15085 1522 aa29.2■■■□□ 2.26
ATG3-201ENST00000283290 NUP160Q12769 1436 aa29.2■■■□□ 2.26
ATG3-201ENST00000283290 CARMIL1Q5VZK9 1371 aa29.14■■■□□ 2.26
ATG3-201ENST00000283290 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
ATG3-201ENST00000283290 CSRNP3Q8WYN3 585 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms