RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
PDCD4-201ENST00000280154 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
PDCD4-201ENST00000280154 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
PDCD4-201ENST00000280154 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
PDCD4-201ENST00000280154 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
PDCD4-201ENST00000280154 NACADO15069 1562 aa17.99■□□□□ 0.47
PDCD4-201ENST00000280154 ABCC9O60706 1549 aa17.84■□□□□ 0.45
PDCD4-201ENST00000280154 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
PDCD4-201ENST00000280154 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
PDCD4-201ENST00000280154 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
PDCD4-201ENST00000280154 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
PDCD4-201ENST00000280154 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
PDCD4-201ENST00000280154 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
PDCD4-201ENST00000280154 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
PDCD4-201ENST00000280154 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
PDCD4-201ENST00000280154 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
PDCD4-201ENST00000280154 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
PDCD4-201ENST00000280154 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
PDCD4-201ENST00000280154 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
PDCD4-201ENST00000280154 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
PDCD4-201ENST00000280154 HMGXB3Q12766 1538 aa16.61■□□□□ 0.25
PDCD4-201ENST00000280154 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
PDCD4-201ENST00000280154 EHMT2Q96KQ7 1210 aa16.6■□□□□ 0.25
PDCD4-201ENST00000280154 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
PDCD4-201ENST00000280154 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
PDCD4-201ENST00000280154 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
PDCD4-201ENST00000280154 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
PDCD4-201ENST00000280154 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
PDCD4-201ENST00000280154 WIZO95785 1651 aa16.47■□□□□ 0.23
PDCD4-201ENST00000280154 MYT1Q01538 1121 aa16.46■□□□□ 0.23
PDCD4-201ENST00000280154 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDCD4-201ENST00000280154 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
PDCD4-201ENST00000280154 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
PDCD4-201ENST00000280154 PRDM2Q13029 1718 aa16.32■□□□□ 0.2
PDCD4-201ENST00000280154 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
PDCD4-201ENST00000280154 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
PDCD4-201ENST00000280154 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
PDCD4-201ENST00000280154 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
PDCD4-201ENST00000280154 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
PDCD4-201ENST00000280154 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
PDCD4-201ENST00000280154 CFTRP13569 1480 aa16.01■□□□□ 0.15
PDCD4-201ENST00000280154 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
PDCD4-201ENST00000280154 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
PDCD4-201ENST00000280154 TTBK1Q5TCY1 1321 aaPredicted RBP15.91■□□□□ 0.14
PDCD4-201ENST00000280154 APLP2Q06481 763 aa15.86■□□□□ 0.13
PDCD4-201ENST00000280154 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
PDCD4-201ENST00000280154 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.13
PDCD4-201ENST00000280154 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
PDCD4-201ENST00000280154 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
PDCD4-201ENST00000280154 WDR62O43379 1518 aa15.72■□□□□ 0.11
PDCD4-201ENST00000280154 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
PDCD4-201ENST00000280154 WDR97A6NE52 1622 aa15.71■□□□□ 0.1
PDCD4-201ENST00000280154 TOP2BQ02880 1626 aa15.71■□□□□ 0.1
PDCD4-201ENST00000280154 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
PDCD4-201ENST00000280154 NESP48681 1621 aa15.67■□□□□ 0.1
PDCD4-201ENST00000280154 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
PDCD4-201ENST00000280154 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
PDCD4-201ENST00000280154 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
PDCD4-201ENST00000280154 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
PDCD4-201ENST00000280154 CUX1P39880 1505 aa15.6■□□□□ 0.09
PDCD4-201ENST00000280154 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
PDCD4-201ENST00000280154 SYNJ1O43426 1573 aa15.59■□□□□ 0.09
PDCD4-201ENST00000280154 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
PDCD4-201ENST00000280154 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
PDCD4-201ENST00000280154 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
PDCD4-201ENST00000280154 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
PDCD4-201ENST00000280154 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
PDCD4-201ENST00000280154 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
PDCD4-201ENST00000280154 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
PDCD4-201ENST00000280154 CUX2O14529 1486 aa15.47■□□□□ 0.07
PDCD4-201ENST00000280154 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
PDCD4-201ENST00000280154 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
PDCD4-201ENST00000280154 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
PDCD4-201ENST00000280154 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
PDCD4-201ENST00000280154 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
PDCD4-201ENST00000280154 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
PDCD4-201ENST00000280154 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
PDCD4-201ENST00000280154 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
PDCD4-201ENST00000280154 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
PDCD4-201ENST00000280154 PBRM1Q86U86 1689 aa15.34■□□□□ 0.05
PDCD4-201ENST00000280154 TULP1O00294 542 aaPredicted RBP15.3■□□□□ 0.04
PDCD4-201ENST00000280154 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
PDCD4-201ENST00000280154 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
PDCD4-201ENST00000280154 CUL7Q14999 1698 aa15.28■□□□□ 0.04
PDCD4-201ENST00000280154 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.04
PDCD4-201ENST00000280154 EEA1Q15075 1411 aa15.26■□□□□ 0.03
PDCD4-201ENST00000280154 KIF21BO75037 1637 aa15.23■□□□□ 0.03
PDCD4-201ENST00000280154 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
PDCD4-201ENST00000280154 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.02
PDCD4-201ENST00000280154 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
PDCD4-201ENST00000280154 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
PDCD4-201ENST00000280154 SOGA1O94964 1423 aa15.16■□□□□ 0.02
PDCD4-201ENST00000280154 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
PDCD4-201ENST00000280154 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
PDCD4-201ENST00000280154 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
PDCD4-201ENST00000280154 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
PDCD4-201ENST00000280154 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
PDCD4-201ENST00000280154 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
PDCD4-201ENST00000280154 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
PDCD4-201ENST00000280154 GAPVD1Q14C86 1478 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms