RNA–Protein interactions for RNA: ENST00000278224.13

CARS-201, Transcript of cysteinyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene CARS, Length 2,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARS-201ENST00000278224 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
CARS-201ENST00000278224 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
CARS-201ENST00000278224 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
CARS-201ENST00000278224 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
CARS-201ENST00000278224 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
CARS-201ENST00000278224 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
CARS-201ENST00000278224 HRCP23327 699 aa20.83■□□□□ 0.93
CARS-201ENST00000278224 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
CARS-201ENST00000278224 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
CARS-201ENST00000278224 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
CARS-201ENST00000278224 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
CARS-201ENST00000278224 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
CARS-201ENST00000278224 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
CARS-201ENST00000278224 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
CARS-201ENST00000278224 PELP1Q8IZL8 1130 aaKnown RBP19.94■□□□□ 0.78
CARS-201ENST00000278224 ABCC9O60706 1549 aa19.9■□□□□ 0.78
CARS-201ENST00000278224 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
CARS-201ENST00000278224 LOC105371045A0A1W2PR82 267 aa19.84■□□□□ 0.77
CARS-201ENST00000278224 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
CARS-201ENST00000278224 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
CARS-201ENST00000278224 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
CARS-201ENST00000278224 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
CARS-201ENST00000278224 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
CARS-201ENST00000278224 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.67
CARS-201ENST00000278224 MYT1Q01538 1121 aa19.2■□□□□ 0.66
CARS-201ENST00000278224 NACADO15069 1562 aa19.19■□□□□ 0.66
CARS-201ENST00000278224 ACIN1Q9UKV3 1341 aaKnown RBP19.14■□□□□ 0.66
CARS-201ENST00000278224 FAM9AQ8IZU1 332 aaPredicted RBP19.13■□□□□ 0.65
CARS-201ENST00000278224 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
CARS-201ENST00000278224 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
CARS-201ENST00000278224 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
CARS-201ENST00000278224 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
CARS-201ENST00000278224 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
CARS-201ENST00000278224 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
CARS-201ENST00000278224 CECR2Q9BXF3 1484 aa19.02■□□□□ 0.64
CARS-201ENST00000278224 WIZO95785 1651 aa19.01■□□□□ 0.63
CARS-201ENST00000278224 NEUROD1Q13562 356 aa18.94■□□□□ 0.62
CARS-201ENST00000278224 DIEXFQ68CQ4 756 aaKnown RBP18.94■□□□□ 0.62
CARS-201ENST00000278224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
CARS-201ENST00000278224 EEA1Q15075 1411 aa18.89■□□□□ 0.61
CARS-201ENST00000278224 TOP2AP11388 1531 aaKnown RBP18.86■□□□□ 0.61
CARS-201ENST00000278224 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
CARS-201ENST00000278224 GTF3C3Q9Y5Q9 886 aa18.82■□□□□ 0.6
CARS-201ENST00000278224 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
CARS-201ENST00000278224 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
CARS-201ENST00000278224 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
CARS-201ENST00000278224 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
CARS-201ENST00000278224 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
CARS-201ENST00000278224 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
CARS-201ENST00000278224 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
CARS-201ENST00000278224 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
CARS-201ENST00000278224 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
CARS-201ENST00000278224 SOGA1O94964 1423 aa18.58■□□□□ 0.56
CARS-201ENST00000278224 KIF21BO75037 1637 aa18.56■□□□□ 0.56
CARS-201ENST00000278224 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
CARS-201ENST00000278224 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.55
CARS-201ENST00000278224 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
CARS-201ENST00000278224 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
CARS-201ENST00000278224 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
CARS-201ENST00000278224 RUSC2Q8N2Y8 1516 aa18.42■□□□□ 0.54
CARS-201ENST00000278224 VPS8Q8N3P4 1428 aa18.42■□□□□ 0.54
CARS-201ENST00000278224 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
CARS-201ENST00000278224 MIER1Q8N108 512 aa18.39■□□□□ 0.53
CARS-201ENST00000278224 CLIP1P30622 1438 aa18.38■□□□□ 0.53
CARS-201ENST00000278224 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
CARS-201ENST00000278224 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
CARS-201ENST00000278224 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
CARS-201ENST00000278224 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
CARS-201ENST00000278224 APLP2Q06481 763 aa18.28■□□□□ 0.52
CARS-201ENST00000278224 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
CARS-201ENST00000278224 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.5
CARS-201ENST00000278224 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
CARS-201ENST00000278224 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
CARS-201ENST00000278224 DHX57Q6P158 1386 aaKnown RBP18.16■□□□□ 0.5
CARS-201ENST00000278224 TOP2BQ02880 1626 aa18.15■□□□□ 0.5
CARS-201ENST00000278224 CUX2O14529 1486 aa18.15■□□□□ 0.5
CARS-201ENST00000278224 BIVM-ERCC5R4GMW8 1640 aa18.12■□□□□ 0.49
CARS-201ENST00000278224 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
CARS-201ENST00000278224 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
CARS-201ENST00000278224 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.49
CARS-201ENST00000278224 PRXQ9BXM0 1461 aa18.06■□□□□ 0.48
CARS-201ENST00000278224 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
CARS-201ENST00000278224 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
CARS-201ENST00000278224 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
CARS-201ENST00000278224 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
CARS-201ENST00000278224 TSHZ2Q9NRE2 1034 aa17.91■□□□□ 0.46
CARS-201ENST00000278224 ANP32EQ9BTT0 268 aa17.89■□□□□ 0.45
CARS-201ENST00000278224 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
CARS-201ENST00000278224 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.44
CARS-201ENST00000278224 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
CARS-201ENST00000278224 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
CARS-201ENST00000278224 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
CARS-201ENST00000278224 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
CARS-201ENST00000278224 TIAM1Q13009 1591 aa17.77■□□□□ 0.44
CARS-201ENST00000278224 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.43
CARS-201ENST00000278224 CUX1P39880 1505 aa17.77■□□□□ 0.43
CARS-201ENST00000278224 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
CARS-201ENST00000278224 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
CARS-201ENST00000278224 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
CARS-201ENST00000278224 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms