RNA–Protein interactions for RNA: ENST00000276654.9

LRP12-201, Transcript of LDL receptor related protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP12, Length 4,112 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-201ENST00000276654 NISCHQ9Y2I1 1504 aa18.41■□□□□ 0.54
LRP12-201ENST00000276654 ABCC9O60706 1549 aa17.44■□□□□ 0.38
LRP12-201ENST00000276654 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
LRP12-201ENST00000276654 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
LRP12-201ENST00000276654 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.22
LRP12-201ENST00000276654 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
LRP12-201ENST00000276654 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
LRP12-201ENST00000276654 NACADO15069 1562 aa15.81■□□□□ 0.12
LRP12-201ENST00000276654 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
LRP12-201ENST00000276654 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
LRP12-201ENST00000276654 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
LRP12-201ENST00000276654 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
LRP12-201ENST00000276654 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
LRP12-201ENST00000276654 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
LRP12-201ENST00000276654 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
LRP12-201ENST00000276654 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
LRP12-201ENST00000276654 MYO15BQ96JP2 1530 aa15.21■□□□□ 0.02
LRP12-201ENST00000276654 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
LRP12-201ENST00000276654 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
LRP12-201ENST00000276654 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
LRP12-201ENST00000276654 DCAF1Q9Y4B6 1507 aa14.91□□□□□ -0.02
LRP12-201ENST00000276654 CUX2O14529 1486 aa14.88□□□□□ -0.03
LRP12-201ENST00000276654 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
LRP12-201ENST00000276654 NESP48681 1621 aa14.7□□□□□ -0.06
LRP12-201ENST00000276654 OSCARQ8IYS5 282 aa14.69□□□□□ -0.06
LRP12-201ENST00000276654 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
LRP12-201ENST00000276654 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
LRP12-201ENST00000276654 BAZ1BQ9UIG0 1483 aaKnown RBP14.65□□□□□ -0.06
LRP12-201ENST00000276654 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
LRP12-201ENST00000276654 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
LRP12-201ENST00000276654 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
LRP12-201ENST00000276654 FBLN2P98095 1184 aa14.58□□□□□ -0.07
LRP12-201ENST00000276654 CYB5RLQ6IPT4 315 aa14.53□□□□□ -0.08
LRP12-201ENST00000276654 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
LRP12-201ENST00000276654 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
LRP12-201ENST00000276654 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
LRP12-201ENST00000276654 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
LRP12-201ENST00000276654 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
LRP12-201ENST00000276654 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
LRP12-201ENST00000276654 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
LRP12-201ENST00000276654 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
LRP12-201ENST00000276654 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
LRP12-201ENST00000276654 THOC2Q8NI27 1593 aaKnown RBP14.21□□□□□ -0.14
LRP12-201ENST00000276654 CHMP7Q8WUX9 453 aaPredicted RBP14.19□□□□□ -0.14
LRP12-201ENST00000276654 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
LRP12-201ENST00000276654 WDR62O43379 1518 aa14.06□□□□□ -0.16
LRP12-201ENST00000276654 ARHGEF11O15085 1522 aa14□□□□□ -0.17
LRP12-201ENST00000276654 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
LRP12-201ENST00000276654 CFTRP13569 1480 aa13.97□□□□□ -0.17
LRP12-201ENST00000276654 TDRD9Q8NDG6 1382 aaKnown RBP13.97□□□□□ -0.17
LRP12-201ENST00000276654 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
LRP12-201ENST00000276654 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
LRP12-201ENST00000276654 PEG3Q9GZU2 1588 aa13.97□□□□□ -0.17
LRP12-201ENST00000276654 WIZO95785 1651 aa13.97□□□□□ -0.17
LRP12-201ENST00000276654 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
LRP12-201ENST00000276654 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
LRP12-201ENST00000276654 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
LRP12-201ENST00000276654 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
LRP12-201ENST00000276654 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
LRP12-201ENST00000276654 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
LRP12-201ENST00000276654 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
LRP12-201ENST00000276654 SUPT5HO00267 1087 aaKnown RBP13.86□□□□□ -0.19
LRP12-201ENST00000276654 SOGA1O94964 1423 aa13.85□□□□□ -0.19
LRP12-201ENST00000276654 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
LRP12-201ENST00000276654 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
LRP12-201ENST00000276654 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
LRP12-201ENST00000276654 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.2
LRP12-201ENST00000276654 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
LRP12-201ENST00000276654 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
LRP12-201ENST00000276654 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
LRP12-201ENST00000276654 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
LRP12-201ENST00000276654 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
LRP12-201ENST00000276654 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
LRP12-201ENST00000276654 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
LRP12-201ENST00000276654 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
LRP12-201ENST00000276654 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
LRP12-201ENST00000276654 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
LRP12-201ENST00000276654 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
LRP12-201ENST00000276654 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
LRP12-201ENST00000276654 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
LRP12-201ENST00000276654 CHD1O14646 1710 aa13.57□□□□□ -0.24
LRP12-201ENST00000276654 SYNJ2O15056 1496 aa13.56□□□□□ -0.24
LRP12-201ENST00000276654 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
LRP12-201ENST00000276654 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
LRP12-201ENST00000276654 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
LRP12-201ENST00000276654 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
LRP12-201ENST00000276654 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
LRP12-201ENST00000276654 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
LRP12-201ENST00000276654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
LRP12-201ENST00000276654 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
LRP12-201ENST00000276654 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
LRP12-201ENST00000276654 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
LRP12-201ENST00000276654 ARID4BQ4LE39 1312 aaPredicted RBP13.38□□□□□ -0.27
LRP12-201ENST00000276654 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
LRP12-201ENST00000276654 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
LRP12-201ENST00000276654 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
LRP12-201ENST00000276654 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
LRP12-201ENST00000276654 CUX1P39880 1505 aa13.35□□□□□ -0.27
LRP12-201ENST00000276654 PTPRGP23470 1445 aa13.34□□□□□ -0.27
LRP12-201ENST00000276654 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms